Gene EcDH1_2439 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_2439 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp2615601 
End bp2616452 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content53% 
IMG OID 
Product4-diphosphocytidyl-2C-methyl-D-erythritol kinase 
Protein accessionACX40079 
Protein GI260449657 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.00231266 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGGACAC AGTGGCCCTC TCCGGCAAAA CTTAATCTGT TTTTATACAT TACCGGTCAG 
CGTGCGGATG GTTACCACAC GCTGCAAACG CTGTTTCAGT TTCTTGATTA CGGCGACACC
ATCAGCATTG AGCTTCGTGA CGATGGGGAT ATTCGTCTGT TAACGCCCGT TGAAGGCGTG
GAACATGAAG ATAACCTGAT CGTTCGCGCA GCGCGATTGT TGATGAAAAC TGCGGCAGAC
AGCGGGCGTC TTCCGACGGG AAGCGGTGCG AATATCAGCA TTGACAAGCG TTTGCCGATG
GGCGGCGGTC TCGGCGGTGG TTCATCCAAT GCCGCGACGG TCCTGGTGGC ATTAAATCAT
CTCTGGCAAT GCGGGCTAAG CATGGATGAG CTGGCGGAAA TGGGGCTGAC GCTGGGCGCA
GATGTTCCTG TCTTTGTTCG GGGGCATGCC GCGTTTGCCG AAGGCGTTGG TGAAATACTA
ACGCCGGTGG ATCCGCCAGA GAAGTGGTAT CTGGTGGCGC ACCCTGGTGT AAGTATTCCG
ACTCCGGTGA TTTTTAAAGA TCCTGAACTC CCGCGCAATA CGCCAAAAAG GTCAATAGAA
ACGTTGCTAA AATGTGAATT CAGCAATGAT TGCGAGGTTA TCGCAAGAAA ACGTTTTCGC
GAGGTTGATG CGGTGCTTTC CTGGCTGTTA GAATACGCCC CGTCGCGCCT GACTGGGACA
GGGGCCTGTG TCTTTGCTGA ATTTGATACA GAGTCTGAAG CCCGCCAGGT GCTAGAGCAA
GCCCCGGAAT GGCTCAATGG CTTTGTGGCG AAAGGCGCTA ATCTTTCCCC ATTGCACAGA
GCCATGCTTT AA
 
Protein sequence
MRTQWPSPAK LNLFLYITGQ RADGYHTLQT LFQFLDYGDT ISIELRDDGD IRLLTPVEGV 
EHEDNLIVRA ARLLMKTAAD SGRLPTGSGA NISIDKRLPM GGGLGGGSSN AATVLVALNH
LWQCGLSMDE LAEMGLTLGA DVPVFVRGHA AFAEGVGEIL TPVDPPEKWY LVAHPGVSIP
TPVIFKDPEL PRNTPKRSIE TLLKCEFSND CEVIARKRFR EVDAVLSWLL EYAPSRLTGT
GACVFAEFDT ESEARQVLEQ APEWLNGFVA KGANLSPLHR AML