| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcDH1_2417 |
|---|
| Symbol | |
|---|
| ID | 0 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli DH1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | CP001637 |
|---|
| Strand | + |
|---|
| Start bp | 2589854 |
|---|
| End bp | 2590696 |
|---|
| Gene Length | 843 bp |
|---|
| Protein Length | 280 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | |
|---|
| Product | formyltetrahydrofolate deformylase |
|---|
| Protein accession | ACX40058 |
|---|
| Protein GI | 260449636 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.000875082 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCATTCAC TCCAACGTAA AGTTCTGCGT ACTATTTGTC CGGACCAAAA AGGTCTGATC
GCACGTATTA CCAATATTTG CTACAAGCAC GAGTTAAATA TCGTACAGAA CAATGAATTT
GTTGATCACC GTACCGGGCG CTTTTTTATG CGCACGGAAC TGGAAGGGAT TTTTAATGAT
TCCACCCTGC TGGCGGATCT CGATAGCGCA TTGCCAGAAG GCTCCGTGCG TGAGCTGAAT
CCTGCCGGTC GTCGCCGGAT AGTGATTCTG GTCACTAAAG AAGCGCATTG CCTTGGCGAT
TTGTTGATGA AAGCCAATTA CGGCGGCCTG GATGTCGAAA TCGCGGCAGT TATTGGTAAC
CACGATACTT TACGTTCTCT GGTTGAGCGT TTTGATATTC CGTTTGAGCT GGTAAGCCAT
GAAGGGTTAA CCCGCAACGA GCACGATCAA AAGATGGCGG ATGCCATTGA TGCTTATCAA
CCTGACTACG TGGTGCTGGC GAAGTATATG CGGGTATTAA CGCCGGAATT TGTGGCACGC
TTCCCGAATA AGATCATCAA TATTCACCAT TCATTCCTGC CAGCGTTTAT TGGCGCACGT
CCTTATCACC AGGCCTATGA ACGTGGTGTG AAGATTATTG GCGCAACCGC TCACTATGTG
AATGACAATC TGGACGAAGG CCCAATCATC ATGCAGGACG TTATTCATGT CGATCATACC
TACACAGCTG AAGATATGAT GCGCGCAGGT CGTGACGTCG AGAAAAACGT CTTAAGTCGT
GCACTATACA AAGTACTGGC ACAGCGCGTC TTTGTTTACG GTAATCGAAC GATTATTCTT
TAA
|
|---|
| Protein sequence | MHSLQRKVLR TICPDQKGLI ARITNICYKH ELNIVQNNEF VDHRTGRFFM RTELEGIFND
STLLADLDSA LPEGSVRELN PAGRRRIVIL VTKEAHCLGD LLMKANYGGL DVEIAAVIGN
HDTLRSLVER FDIPFELVSH EGLTRNEHDQ KMADAIDAYQ PDYVVLAKYM RVLTPEFVAR
FPNKIINIHH SFLPAFIGAR PYHQAYERGV KIIGATAHYV NDNLDEGPII MQDVIHVDHT
YTAEDMMRAG RDVEKNVLSR ALYKVLAQRV FVYGNRTIIL
|
|---|
| |