Gene EcDH1_2402 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_2402 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp2573910 
End bp2574923 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content52% 
IMG OID 
Productoligopeptide/dipeptide ABC transporter, ATPase subunit 
Protein accessionACX40045 
Protein GI260449623 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.00590084 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGTAA TTGAAACTGC AACTGTGCCG CTCGCACAAC AACAGGCTGA CGCACTGCTG 
AACGTGAAAG ATTTGCGTGT CACCTTTAGT ACCCCGGACG GCGACGTCAC GGCGGTCAAT
GATTTGAATT TTTCCCTACG TGCCGGAGAA ACGCTGGGTA TTGTAGGTGA GTCTGGTTCG
GGTAAATCGC AAACTGCATT TGCGTTGATG GGCCTGTTGG CTGCCAACGG ACGTATTGGC
GGATCGGCAA CCTTCAATGG GCGTGAAATC CTCAATTTGC CAGAGCATGA ACTCAATAAA
CTGCGCGCTG AACAAATCTC AATGATTTTT CAGGACCCAA TGACTTCGTT GAATCCCTAT
ATGCGCGTCG GTGAGCAGTT GATGGAAGTG CTGATGCTGC ATAAGAACAT GAGCAAAGCT
GAGGCGTTTG AAGAGTCGGT GCGGATGCTC GATGCGGTAA AAATGCCGGA AGCGCGTAAA
CGCATGAAAA TGTACCCGCA CGAATTTTCT GGCGGCATGC GTCAGCGAGT CATGATTGCG
ATGGCCTTGT TATGTCGACC TAAGCTGCTG ATTGCGGATG AACCAACAAC TGCGCTGGAC
GTCACCGTAC AGGCGCAGAT CATGACGCTA TTAAATGAAC TGAAGCGGGA ATTTAATACC
GCCATCATTA TGATCACCCA CGATCTTGTC GTGGTGGCGG GGATCTGCGA CAAAGTGCTG
GTAATGTACG CCGGGCGCAC GATGGAATAT GGCAACGCGC GCGATGTCTT TTATCAACCC
GTTCATCCTT ATTCTATCGG TTTGCTCAAC GCGGTGCCGC GTCTCGATGC GGAAGGTGAA
ACAATGTTGA CCATCCCGGG TAATCCGCCA AACCTGCTGC GATTACCGAA AGGTTGCCCG
TTCCAGCCAC GTTGTCCGCA TGCGATGGAA ATTTGTAGTA GCGCACCGCC GCTGGAAGAG
TTTACGCCTG GCCGTCTGCG TGCTTGCTTT AAACCGGTGG AGGAACTGTT ATGA
 
Protein sequence
MSVIETATVP LAQQQADALL NVKDLRVTFS TPDGDVTAVN DLNFSLRAGE TLGIVGESGS 
GKSQTAFALM GLLAANGRIG GSATFNGREI LNLPEHELNK LRAEQISMIF QDPMTSLNPY
MRVGEQLMEV LMLHKNMSKA EAFEESVRML DAVKMPEARK RMKMYPHEFS GGMRQRVMIA
MALLCRPKLL IADEPTTALD VTVQAQIMTL LNELKREFNT AIIMITHDLV VVAGICDKVL
VMYAGRTMEY GNARDVFYQP VHPYSIGLLN AVPRLDAEGE TMLTIPGNPP NLLRLPKGCP
FQPRCPHAME ICSSAPPLEE FTPGRLRACF KPVEELL