Gene EcDH1_2378 details

Gene Information

• Locus tag: EcDH1_2378
• ID: 0
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Escherichia coli DH1
• Kingdom: Bacteria
• Replicon accession: CP001637
• Strand: +
• Start bp: 2550565
• End bp: 2551323
• Gene Length: 759 bp
• Protein Length: 252 aa
• Translation table: 11
• GC content: 52%
• Product: short-chain dehydrogenase/reductase SDR
• Protein accession: ACX40021
• Protein GI: 260449599

Plasmid Coverage information

• Num covering plasmid clones: 25
• Plasmid unclonability p-value: 0.0592861
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCATTACC AGCCAAAACA AGATTTACTC AATGATCGCA TTATCCTGGT GACGGGAGCC 
AGCGATGGTA TTGGTCGTGA AGCCGCGATG ACGTATGCAC GCTATGGTGC GACAGTGATT 
CTGTTGGGCC GTAATGAAGA AAAATTACGT CAGGTAGCCA GCCACATAAA CGAAGAAACT 
GGGCGTCAGC CACAGTGGTT TATTCTCGAT TTGCTGACCT GCACGTCCGA AAATTGCCAA 
CAACTGGCAC AGCGCATTGC CGTTAATTAT CCGCGTCTGG ATGGTGTTTT GCATAATGCC 
GGATTGCTCG GCGATGTTTG CCCAATGAGC GAACAAAATC CGCAGGTCTG GCAGGACGTC 
ATGCAGGTCA ACGTTAATGC CACCTTTATG CTCACCCAGG CACTGCTTCC TTTATTACTC 
AAATCGGACG CCGGTTCACT GGTCTTTACT TCATCAAGCG TTGGACGTCA GGGACGAGCC 
AACTGGGGTG CATATGCAGC GTCGAAATTT GCCACCGAAG GGATGATGCA GGTACTGGCC 
GATGAATATC AGCAGCGCCT GCGTGTCAAC TGCATTAACC CAGGCGGTAC GCGCACCGCA 
ATGCGTGCCA GCGCCTTCCC GACCGAAGAT CCACAGAAAC TTAAAACACC CGCTGATATC 
ATGCCGCTCT ACCTCTGGCT GATGGGCGAT GACAGCCGCC GTAAAACCGG CATGACCTTT 
GACGCCCAAC CGGGCCGTAA ACCAGGAATT TCCCAATGA 

 

Protein sequence

MHYQPKQDLL NDRIILVTGA SDGIGREAAM TYARYGATVI LLGRNEEKLR QVASHINEET 
GRQPQWFILD LLTCTSENCQ QLAQRIAVNY PRLDGVLHNA GLLGDVCPMS EQNPQVWQDV 
MQVNVNATFM LTQALLPLLL KSDAGSLVFT SSSVGRQGRA NWGAYAASKF ATEGMMQVLA 
DEYQQRLRVN CINPGGTRTA MRASAFPTED PQKLKTPADI MPLYLWLMGD DSRRKTGMTF 
DAQPGRKPGI SQ