Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcDH1_2361 |
Symbol | |
ID | 0 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli DH1 |
Kingdom | Bacteria |
Replicon accession | CP001637 |
Strand | + |
Start bp | 2532935 |
End bp | 2534920 |
Gene Length | 1986 bp |
Protein Length | 661 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | |
Product | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) |
Protein accession | ACX40004 |
Protein GI | 260449582 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.000283064 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAACCG TTAGGGAGTC CACAACGTTG TACAACTTTC TCGGATCGCA CAATCCATAC TGGCGGTTGA CGGAAAGCAG CGATGTTTTG CGCTTTTCTA CCACCGAAAC CACAGAACCT GATCGTACAT TGCAGTTATC TGCCGAACAG GCTGCTCGCA TCAGGGAAAT GACGGTCATC ACCTCCAGCC TGATGATGAG TCTGACCGTC GATGAAAGCG ATCTTTCTGT GCATCTGGTA GGACGAAAAA TCAATAAACG GGAATGGGCT GGCAACGCGT CTGCATGGCA TGACACACCG GCGGTTGCTC GTGATTTATC ACACGGGCTT TCCTTTGCTG AGCAGGTAGT TTCTGAAGCA CATTCCGCAA TAGTGATTCT CGACAGCCGG GGGAATATCC AACGCTTCAA TCGGTTATGT GAAGATTACA CAGGGTTGAA AGAACACGAC GTCATTGGGC AAAGCGTGTT TAAACTGTTT ATGAGCCGTC GTGAAGCTGC GGCATCCAGG CGCAATAACC GTGTATTTTT TCGAAGCGGC AATGCATATG AAGTCGAACT GTGGATACCA ACATGTAAAG GCCAGCGGCT GTTTCTGTTT CGCAATAAAT TTGTCCACAG CGGCAGTGGC AAAAACGAGA TTTTTTTAAT CTGTTCCGGC ACCGACATTA CCGAAGAGCG CCGCGCTCAG GAGCGACTGC GTATTCTGGC AAATACCGAC AGTATCACCG GACTGCCGAA TCGTAACGCA ATGCAGGATT TAATCGATCA CGCTATTAAT CATGCAGATA ACAATAAAGT TGGGGTTGTG TATCTTGATT TGGATAATTT CAAAAAGGTC AACGACGCCT ATGGGCATTT GTTTGGTGAC CAGTTATTAC GCGACGTGTC ATTGGCTATT TTAAGCTGTC TCGAACATGA CCAGGTGTTG GCGCGTCCAG GTGGGGATGA GTTTCTGGTA CTGGCATCCA ACACCTCACA AAGCGCGCTG GAAGCAATGG CATCACGAAT TTTGACCCGC TTACGGCTCC CCTTTCGCAT TGGTTTAATT GAAGTTTATA CCAGCTGTTC AGTAGGTATT GCACTCTCTC CCGAACATGG TTCAGACAGC ACGGCTATTA TTCGTCACGC CGACACAGCA ATGTACACAG CGAAGGAAGG CGGACGAGGA CAATTTTGCG TTTTTACCCC AGAAATGAAT CAACGGGTAT TTGAATATCT CTGGCTGGAT ACCAACTTGC GTAAAGCACT GGAAAACGAT CAGTTGGTTA TTCACTATCA ACCGAAAATC ACCTGGCGTG GCGAAGTGCG CAGTCTGGAA GCACTAGTAC GTTGGCAGTC ACCTGAACGT GGGTTGATTC CACCGTTGGA CTTCATTTCC TACGCCGAAG AGTCAGGGCT AATTGTGCCT TTAGGCCGTT GGGTGATTCT CGATGTCGTA CGCCAGGTGG CAAAGTGGCG GGATAAAGGC ATAAACCTGC GAGTGGCGGT AAATATTTCT GCACGTCAGC TCGCCGATCA AACCATTTTC ACCGCCCTGA AACAGGTTCT CCAGGAACTC AATTTTGAAT ACTGCCCTAT AGATGTTGAA CTGACAGAGA GTTGTCTGAT TGAGAATGAT GAACTGGCAC TGTCTGTTAT TCAACAATTT AGCCAACTAG GTGCGCAAGT GCATCTGGAT GATTTTGGTA CCGGCTACTC TTCACTTTCG CAACTGGCGC GCTTTCCGAT CGATGCCATC AAACTTGACC AGGTTTTTGT TCGAGATATT CACAAACAAC CTGTCTCGCA GTCACTGGTC CGGGCGATCG TCGCTGTGGC CCAGGCATTG AATCTTCAGG TGATCGCCGA AGGTGTAGAG AGTGCAAAGG AAGATGCTTT TTTAACCAAG AACGGGATCA ATGAGCGGCA AGGATTTTTG TTTGCCAAAC CGATGCCCGC CGTCGCCTTC GAACGCTGGT ATAAACGCTA TCTGAAGCGC GCATAA
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Protein sequence | MKTVRESTTL YNFLGSHNPY WRLTESSDVL RFSTTETTEP DRTLQLSAEQ AARIREMTVI TSSLMMSLTV DESDLSVHLV GRKINKREWA GNASAWHDTP AVARDLSHGL SFAEQVVSEA HSAIVILDSR GNIQRFNRLC EDYTGLKEHD VIGQSVFKLF MSRREAAASR RNNRVFFRSG NAYEVELWIP TCKGQRLFLF RNKFVHSGSG KNEIFLICSG TDITEERRAQ ERLRILANTD SITGLPNRNA MQDLIDHAIN HADNNKVGVV YLDLDNFKKV NDAYGHLFGD QLLRDVSLAI LSCLEHDQVL ARPGGDEFLV LASNTSQSAL EAMASRILTR LRLPFRIGLI EVYTSCSVGI ALSPEHGSDS TAIIRHADTA MYTAKEGGRG QFCVFTPEMN QRVFEYLWLD TNLRKALEND QLVIHYQPKI TWRGEVRSLE ALVRWQSPER GLIPPLDFIS YAEESGLIVP LGRWVILDVV RQVAKWRDKG INLRVAVNIS ARQLADQTIF TALKQVLQEL NFEYCPIDVE LTESCLIEND ELALSVIQQF SQLGAQVHLD DFGTGYSSLS QLARFPIDAI KLDQVFVRDI HKQPVSQSLV RAIVAVAQAL NLQVIAEGVE SAKEDAFLTK NGINERQGFL FAKPMPAVAF ERWYKRYLKR A
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