Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcDH1_2343 |
Symbol | |
ID | 0 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli DH1 |
Kingdom | Bacteria |
Replicon accession | CP001637 |
Strand | + |
Start bp | 2511765 |
End bp | 2512742 |
Gene Length | 978 bp |
Protein Length | 325 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | |
Product | sigma54 specific transcriptional acivator, PspF, Fis family |
Protein accession | ACX39986 |
Protein GI | 260449564 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.00890881 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAGAAT ACAAAGATAA TTTACTTGGT GAGGCGAACA GCTTTCTCGA AGTGCTGGAA CAGGTTTCGC ATCTCGCACC GCTGGACAAA CCGGTGCTCA TCATCGGCGA ACGCGGCACC GGTAAAGAGC TGATTGCCAG CCGCCTGCAT TATCTCTCCT CCCGTTGGCA AGGGCCGTTT ATTTCCCTTA ACTGCGCGGC GTTAAATGAA AATCTGCTGG ATTCCGAACT GTTTGGTCAC GAAGCGGGGG CGTTTACCGG TGCGCAAAAA CGTCATCCAG GGAGATTTGA ACGTGCCGAC GGCGGTACGC TATTTCTTGA TGAACTCGCT ACGGCACCGA TGATGGTGCA GGAGAAATTA TTGCGCGTGA TTGAGTACGG TGAACTGGAG CGCGTTGGCG GCAGCCAACC ATTGCAGGTG AATGTGCGGT TGGTATGCGC GACGAATGCC GATCTCCCGG CGATGGTCAA TGAAGGCACT TTTCGCGCTG ACCTGCTCGA CCGACTGGCT TTTGATGTTG TACAACTGCC ACCACTGCGC GAGCGCGAAA GCGACATAAT GTTGATGGCA GAATACTTTG CCATCCAGAT GTGTCGGGAA ATCAAGCTGC CTCTGTTCCC GGGGTTTACG GAGCGCGCCA GAGAAACATT GCTGAATTAT CGTTGGCCGG GAAATATTCG TGAATTGAAA AACGTGGTGG AACGTTCAGT GTATCGCCAC GGCACCAGCG ATTATCCGCT TGATGACATC ATTATTGATC CCTTTAAACG GCGTCCGCCT GAAGACGCTA TCGCCGTTTC AGAAACCACC TCGCTTCCAA CACTGCCGCT GGATTTACGT GAGTTTCAGA TGCAGCAGGA AAAAGAGTTG CTGCAACTCA GTTTGCAACA AGGGAAATAT AACCAGAAGC GCGCGGCTGA ATTACTGGGG TTAACTTATC ATCAGTTCCG CGCGTTGTTG AAAAAGCACC AGATTTAG
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Protein sequence | MAEYKDNLLG EANSFLEVLE QVSHLAPLDK PVLIIGERGT GKELIASRLH YLSSRWQGPF ISLNCAALNE NLLDSELFGH EAGAFTGAQK RHPGRFERAD GGTLFLDELA TAPMMVQEKL LRVIEYGELE RVGGSQPLQV NVRLVCATNA DLPAMVNEGT FRADLLDRLA FDVVQLPPLR ERESDIMLMA EYFAIQMCRE IKLPLFPGFT ERARETLLNY RWPGNIRELK NVVERSVYRH GTSDYPLDDI IIDPFKRRPP EDAIAVSETT SLPTLPLDLR EFQMQQEKEL LQLSLQQGKY NQKRAAELLG LTYHQFRALL KKHQI
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