Gene EcDH1_2276 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_2276 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp2449752 
End bp2450732 
Gene Length981 bp 
Protein Length326 aa 
Translation table11 
GC content55% 
IMG OID 
Producttransposase IS4 family protein 
Protein accessionACX39922 
Protein GI260449500 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.540999 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCCATC AACTCACCTT CGCCGATAGT GAATTCAGCA CTAAGCGCCG TCAGACCCGA 
AAAGAGATTT TCCTCTCCCG CATGGAGCAG ATTCTGCCAT GGCAGAATAT GACCGCTGTC
ATCGAGCCGT TTTATCCCAA GGCGGGCAAT GGCCGACGGC CCTATCCGCT GGAGACCATG
CTGCGTATTC ACTGCATGCA GCATTGGTAC AACCTGAGCG ACGGTGCCAT GGAAGATGCC
CTGTACGAAA TCGCCTCCAT GCGCCTGTTT GCCCGATTAT CCCTGGATAG CGCCCTGCCG
GATCGCACCA CCATCATGAA TTTCCGCCAC CTGCTCGAGC AGCATCAACT GGCCCGTCAA
TTGTTCAAGA CCATCAATCG CTGGCTGGCC GAAGCAGGCG TCATGATGAC CCAAGGCACT
TTGGTGGATG CCACCATCAT TGAGGCACCC AGCTCTACCA AGAACAAAGA GCAGCAACGC
GATCCGGAGA TGCATCAGAC CAAGAAAGGC AATCAGTGGC ACTTTGGCAT GAAGGCCCAC
ATTGGTGTCG ATGCCAAGAG TGGCCTGACC CACAGCCTGG TCACCACCGC GGCCAACGAG
CATGACCTCA ATCAGCTGGG TAATCTGCTT CATGGAGAGG AGCAATTTGT CTCAGCCGAT
GCCGGCTACC AAGGAGCGCC ACAGCGCGAG GAGCTGGCCG AGGTGGATGT GGACTGGCTG
ATCGCCGAGC GTCCCGGCAA GGTAAAAACC TTGAAGCAGA ATCCGCGCAA GAACAAAACG
GCCATCAACA TCGAATACAT GAAAGCCAGC ATCCGTGCCA GGGTGGAGCA CCCGTTTCGC
ATCATCAAGC GGCAGTTCGG CTTCGTGAAA GCCAGATACA AGGGGCTGCT GAAAAACGAT
AACCAACTGG CGATGTTATT CACCCTGGCC AACCTGTTTC GGGTGGACCA AATGATACGT
CAGTGGGAGA GATCTCAGTA A
 
Protein sequence
MSHQLTFADS EFSTKRRQTR KEIFLSRMEQ ILPWQNMTAV IEPFYPKAGN GRRPYPLETM 
LRIHCMQHWY NLSDGAMEDA LYEIASMRLF ARLSLDSALP DRTTIMNFRH LLEQHQLARQ
LFKTINRWLA EAGVMMTQGT LVDATIIEAP SSTKNKEQQR DPEMHQTKKG NQWHFGMKAH
IGVDAKSGLT HSLVTTAANE HDLNQLGNLL HGEEQFVSAD AGYQGAPQRE ELAEVDVDWL
IAERPGKVKT LKQNPRKNKT AINIEYMKAS IRARVEHPFR IIKRQFGFVK ARYKGLLKND
NQLAMLFTLA NLFRVDQMIR QWERSQ