| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcDH1_2269 |
|---|
| Symbol | |
|---|
| ID | 0 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli DH1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | CP001637 |
|---|
| Strand | + |
|---|
| Start bp | 2441585 |
|---|
| End bp | 2442718 |
|---|
| Gene Length | 1134 bp |
|---|
| Protein Length | 377 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | |
|---|
| Product | porin Gram-negative type |
|---|
| Protein accession | ACX39916 |
|---|
| Protein GI | 260449494 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 0.421789 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAGCA AAGTACTGGC ACTTTTAATT CCTGCCCTGC TCGCCGCAGG TGCTGCACAT
GCAGCCGAAG TTTATAATAA AGACGGCAAC AAATTAGATC TGTATGGCAA AGTTGATGGC
CTGCATTATT TTTCTGATAA TTCAGCGAAA GATGGCGACC AGAGCTATGC GCGTCTGGGT
TTTAAAGGCG AAACCCAAAT TAACGATCAA CTCACTGGCT ACGGTCAATG GGAATACAAT
ATTCAGGCAA ACAACACTGA ATCTTCAAAA AACCAGTCAT GGACCCGTCT GGCATTTGCC
GGGCTGAAAT TTGCAGATTA CGGTTCTTTC GATTACGGAC GTAATTATGG CGTAATGTAC
GACATCGAAG GCTGGACCGA TATGCTGCCT GAATTTGGCG GTGACTCTTA TACCAATGCA
GACAACTTTA TGACTGGTCG AGCCAATGGC GTCGCGACTT ATCGTAATAC TGATTTCTTC
GGTCTGGTAA ATGGTCTGAA CTTCGCGGTG CAGTATCAAG GTAACAACGA AGGAGCCAGT
AATGGTCAGG AAGGCACCAA CAACGGACGT GATGTTCGCC ATGAAAACGG TGACGGCTGG
GGTCTTTCCA CAACATATGA TTTAGGCATG GGCTTTAGCG CTGGTGCGGC ATACACCTCT
TCTGACCGCA CCAATGACCA GGTTAACCAT ACTGCGGCGG GTGGTGATAA AGCAGACGCG
TGGACTGCTG GGCTAAAATA CGATGCTAAC AATATTTACC TGGCAACCAT GTATTCAGAA
ACGCGTAATA TGACCCCGTT TGGCGACAGC GATTATGCTG TGGCAAACAA AACCCAGAAT
TTTGAAGTCA CTGCACAGTA CCAGTTTGAT TTTGGTCTGC GTCCGGCAGT CTCTTTCCTG
ATGTCTAAAG GCCGTGACCT GCACGCTGCG GGTGGTGCAG ACAACCCGGC AGGTGTTGAT
GATAAAGATC TGGTTAAATA CGCCGATATT GGCGCGACTT ACTATTTCAA TAAAAACATG
TCCACCTACG TTGACTATAA AATCAACCTG TTGGATGAAG ATGACAGCTT CTACGCTGCC
AATGGCATCT CTACCGATGA TATTGTCGCT TTAGGTCTGG TTTATCAGTT CTAA
|
|---|
| Protein sequence | MKSKVLALLI PALLAAGAAH AAEVYNKDGN KLDLYGKVDG LHYFSDNSAK DGDQSYARLG
FKGETQINDQ LTGYGQWEYN IQANNTESSK NQSWTRLAFA GLKFADYGSF DYGRNYGVMY
DIEGWTDMLP EFGGDSYTNA DNFMTGRANG VATYRNTDFF GLVNGLNFAV QYQGNNEGAS
NGQEGTNNGR DVRHENGDGW GLSTTYDLGM GFSAGAAYTS SDRTNDQVNH TAAGGDKADA
WTAGLKYDAN NIYLATMYSE TRNMTPFGDS DYAVANKTQN FEVTAQYQFD FGLRPAVSFL
MSKGRDLHAA GGADNPAGVD DKDLVKYADI GATYYFNKNM STYVDYKINL LDEDDSFYAA
NGISTDDIVA LGLVYQF
|
|---|
| |