Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcDH1_2240 |
Symbol | |
ID | 0 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli DH1 |
Kingdom | Bacteria |
Replicon accession | CP001637 |
Strand | - |
Start bp | 2404465 |
End bp | 2407788 |
Gene Length | 3324 bp |
Protein Length | 1107 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | |
Product | Autotransporter beta- domain protein |
Protein accession | ACX39888 |
Protein GI | 260449466 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.400804 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACGGAAC AACATAGCGT ATTTAACAAG TATTCAACGG GCACATCGAA TTCATTTATT TTTAATAACG ATGTCAGTAG CATAACAGGG TTAGTCGCTC AATCGAATAG CACAATTATC AATACTGACA GCGGCATCAT TGATTTGTAT GGTCGTGGTA GTGTCGGCAT GCTTGCTATA GCAGATTCAA CAGCAGAAAA TCAGGGTAAA ATTACACTGG ATTCTATGTG GGTAGATGCA AATGACACTA CCGCAATGCG AGATATAGCT AGCAACAGCG CCATTGACTT CGGTACAGGT GTGGGAGTTG GTACTGATAG TTATAGTGGT GCAGGGAAAA ATGCAACAGC AATTAACCAA TTGGGCGGTG TTATAACTAT TTATAACGCC GGCGCAGGTA TGGCGGCCTA TGGCGCCAGC AATACAGTTA TTAACCAGGG GACGATTAAC CTCGAAAAAA ATGGTAATTA TGACGATAGT CTGGCAGCAA ATACTCTGGT AGGGATGGCT GTTTATGAGC ATGGTACTGC TATCAACGAC CAGACGGGTG TTATCAATAT CAATGTTGGT ACTGGTCAGG CGTTTTATAA CGATGGCACA GGAACAATTG TTAACTATGG TACAATCTGC ACTTTCGGCG TGTGCCAATC GGGGAATGAG TACAATAATA CAGATGATTT CACCTCACTG ATCTATACCG GTGGCGATAC GATTACACGA AGCGGAGAAA CTGTAACGCT AAATAAATCT GCTGCTGTGA CTGATAAGCT GGCTGGGAAT GTTGTTAATA GCGGAACGCT TTCCGGTGAT CAAATTACGG TATCAAGCGG TCTTCTGGAA AATACCAGCG GTGGCATCAT CAATAACTTA GTAAAACTTG ACAAGGGTGC CGTCATTAAA AATGCCGGGG TGATGACGAA TAACGTCGAT GTTAGCGGTG GAATCCTCAA TAATGCCGGA GAAATGACTG CGCAAATTAC CATGAATGCT GGTGCTGATA GTTCGTTAGT GAACAACACC GGAACCATCA ATAAAATCGT GCAGAACGCG GGGGTATTCA ATAATAGTGG CAGTGTAACA GGGCGGATGA TGTCGGCTGG CGGGGTCTTT AATAATCAAA CTGACGGGGC GATTATGAGA GGTGCTGCGC TGACAGGTAC TGCAGTGGCA AATAACGAAG GAACCTGGAA CCTCGGAAGT AGTAGTGAGG GTAACAACAC CGGGATGCTG GAAGTTAATA ATAATTCAGC TTTCAATAAC CGCGGCGAGT TTATTCTTGA TAACGACAAG AATGCTGTGC ACATCAACCA GTCCGGTACG CTTTATAATA CCGGTCACAT GAACATCAGT AATTCTTCCC ACAACGGAGC CGTTAATATG TGGGGCGGAA ATGGTCGTTT TATCAATGAC GGAACGATTG ATGTTTCTGC GAAGTCACTG GTAGTCAGCG CTAATAATGC CGGCGATCAG AATGCCTTCT TCTGGAACCA GGATAACGGG GTCATCAACT TCGATCACGA CAGCGCCAGT GCCGTGAAAG TCACCCACAG CAACTTTATT GCCCAGAATG ACGGCATCAT GAACATCAGC GGCACCGGTG CTGTGGCTAT GGAAGGTGAT AAGAACGCGC AGCTGGTTAA CAATGGCACC ATCAACCTCG GTACCGCAGG CACTACTGAC ACGGGTATGA TCGGTATGCA ACTCGATGCC AACGCCACGG CGGATGCGGT AATCGAAAAC AACGGCACCA TCAATATCTT CGCCAATGAC TCGTTTGCAT TTAGCGTACT GGGTACAGTA GGTCATGTGG TTAACAACGG CACGGTGGTG ATTGCCGATG GGGTTACGGG TTCTGGACTG ATCAAGCAGG GCGACAGCAT CAATGTTGAA GGTATGAACG GTAACAACGG TAATAGCAGC GAAGTGCATT ATGGCGACTA TACGTTGCCG GATGTGCCGA AGCCCAATAC GGTTAGTGTA ACGTCGGGAA GTGATGAGGC TGGTGGCAGC ATGAACAACC TCAACGGCTA TGTCGTCGGT ACCAACGTTA ACGGCAGCGC CGGGAAGCTG AAGGTTAACA ATGCCAGCAT GAACGGCGTG GAGATTAACA CGGGCTTTAC CGCTGGTACG GCAGACACCA CTGTGAGTTT TGATAACGTA GTGGAAGGTA GCAACCTGAC CGACGCTGAC GCCATCACCT CAACGTCCGT GGTATGGACT GCCAAAGGCA GCACCGATGC CAGCGGTAAC GTTGACGTCA CCATGAGCAA AAATGCCTAC ACCGATGTGG CAACAGATGC CTCGGTGAAT GACATCGCGA AAGCACTGGA TGCGGGTTAC ACCAACAACG AACTGTTTAC CAGCCTGAAC GTCGGCACGA CTGCTGAACT GAACAGTGCT CTGAAACAGG TCAGCGGTAG CCAGGCGACC ACGGTATTCC GCGAAGCGCG CGTGTTAAGC AACCGCTTTA GTATGCTGGC AGATGCCGCG CCGAAAGTGG GTAACGGTCT GGCGTTCAAC GTTGTCGCGA AAGGCGATCC GCGTGCCGAG TTAGGTAATA ATACCGAATA CGACATGCTG GCATTGCGTA AAACTATCGA CCTGAGCGAA AGCCAGACGA TGAGTCTGGA GTACGGTATC GCTCGTCTCG ATGGTGATGG TGCGCAGAAA GCGGGTGATA ATGGCGTTAC AGGCGGTTAT AGCCAGTTTT TTGGCCTGAA ACATCAGATG TCGTTCGATA ACGGCATGAA CTGGAATAAC GCCTTGCGTT ACGACGTTCA CAACCTTGAC AGCAGCCGCT CGATTGCATT TGGCAACACG AACAAAACGG CTGATACCGA CGTGAAACAG CAGTACCTGG AGTTCCGCAG CGAAGGGGCG AAGACTTTCG AACCGAGCGA AGGACTGAAG GTTACGCCAT ATGCGGGTGT AAAACTGCGT CACACACTGG AAGGTGGCTA TCAGGAGCGC AATGCCGGAG ACTTTAACCT GAATATGAAC AGTGGCAGCG AAACGGCGGT GGACAGCATC GTCGGGCTGA AACTGGACTA CGCAGGTAAA GACGGCTGGA GCGCTAGCGC TACGCTGGAA GGCGGGCCGA ACCTGAGCTA CGCGAAGAGC CAGCGTACGG CAAGCCTGGC AGGCGCAGGC AGTCAGCACT TTAACGTCGA TGACGGTCAG AAGGGCGGCG GCATCAATAG CCTGACAAGC GTCGGCGTGA AGTACAGCAG CAAAGAAAGT TCGCTGAATC TGGATGCGTA CAACTGGAAA GAGGATGGCA TCAGCGATAA AGGCGTGATG CTGAACTTCA AGAAAACGTT CTAA
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Protein sequence | MTEQHSVFNK YSTGTSNSFI FNNDVSSITG LVAQSNSTII NTDSGIIDLY GRGSVGMLAI ADSTAENQGK ITLDSMWVDA NDTTAMRDIA SNSAIDFGTG VGVGTDSYSG AGKNATAINQ LGGVITIYNA GAGMAAYGAS NTVINQGTIN LEKNGNYDDS LAANTLVGMA VYEHGTAIND QTGVININVG TGQAFYNDGT GTIVNYGTIC TFGVCQSGNE YNNTDDFTSL IYTGGDTITR SGETVTLNKS AAVTDKLAGN VVNSGTLSGD QITVSSGLLE NTSGGIINNL VKLDKGAVIK NAGVMTNNVD VSGGILNNAG EMTAQITMNA GADSSLVNNT GTINKIVQNA GVFNNSGSVT GRMMSAGGVF NNQTDGAIMR GAALTGTAVA NNEGTWNLGS SSEGNNTGML EVNNNSAFNN RGEFILDNDK NAVHINQSGT LYNTGHMNIS NSSHNGAVNM WGGNGRFIND GTIDVSAKSL VVSANNAGDQ NAFFWNQDNG VINFDHDSAS AVKVTHSNFI AQNDGIMNIS GTGAVAMEGD KNAQLVNNGT INLGTAGTTD TGMIGMQLDA NATADAVIEN NGTINIFAND SFAFSVLGTV GHVVNNGTVV IADGVTGSGL IKQGDSINVE GMNGNNGNSS EVHYGDYTLP DVPKPNTVSV TSGSDEAGGS MNNLNGYVVG TNVNGSAGKL KVNNASMNGV EINTGFTAGT ADTTVSFDNV VEGSNLTDAD AITSTSVVWT AKGSTDASGN VDVTMSKNAY TDVATDASVN DIAKALDAGY TNNELFTSLN VGTTAELNSA LKQVSGSQAT TVFREARVLS NRFSMLADAA PKVGNGLAFN VVAKGDPRAE LGNNTEYDML ALRKTIDLSE SQTMSLEYGI ARLDGDGAQK AGDNGVTGGY SQFFGLKHQM SFDNGMNWNN ALRYDVHNLD SSRSIAFGNT NKTADTDVKQ QYLEFRSEGA KTFEPSEGLK VTPYAGVKLR HTLEGGYQER NAGDFNLNMN SGSETAVDSI VGLKLDYAGK DGWSASATLE GGPNLSYAKS QRTASLAGAG SQHFNVDDGQ KGGGINSLTS VGVKYSSKES SLNLDAYNWK EDGISDKGVM LNFKKTF
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