| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcDH1_2223 |
|---|
| Symbol | |
|---|
| ID | 0 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli DH1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | CP001637 |
|---|
| Strand | - |
|---|
| Start bp | 2381847 |
|---|
| End bp | 2383190 |
|---|
| Gene Length | 1344 bp |
|---|
| Protein Length | 447 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | |
|---|
| Product | protein of unknown function DUF1338 |
|---|
| Protein accession | ACX39872 |
|---|
| Protein GI | 260449450 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 0.350625 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGAACA GCATCACGGC GGATGAGATT CGGGAACAGT TTTCGCAGGC AATGTCAGCC
ATGTACCAGC AAGAAGTTCC GCAATATGGC ACGCTGCTGG AACTGGTAGC TGATGTGAAT
CTGGCTGTGC TGGAAAACAA TCCTCAACTG CACGAAAAAA TGGTAAATGC AGACGAGCTG
GCGCGACTGA ATGTTGAACG TCATGGGGCG ATTCGCGTTG GGACTGCACA AGAGCTTGCT
ACTCTTCGGC GGATGTTTGC CATTATGGGG ATGTACCCGG TGAGCTATTA CGATCTCTCG
CAGGCAGGGG TGCCGGTACA TTCGACAGCA TTTCGGCCCA TTGATGATGC TTCTCTGGCG
CGTAATCCCT TCCGCGTTTT TACCTCCTTA CTCCGCCTTG AGCTTATCGA GAACGAAATT
TTGCGCCAGA AAGCGGCGGA GATTCTGCGT CAGCGCGATA TCTTCACCCC ACGTTGTCGA
CAACTGTTAG AGGAATATGA GCAGCAGGGC GGTTTTAACG AAACACAGGC ACAGGAGTTT
GTGCAGGAAG CCCTGGAAAC GTTTCGCTGG CACCAGTCAG CAACGGTAGA TGAAGAAACC
TATCGCGCAT TGCACAACGA ACATCGGTTG ATTGCTGATG TGGTCTGTTT TCCTGGATGC
CATATCAACC ACCTGACGCC ACGTACGCTG GATATTGACC GGGTGCAGTC GATGATGCCT
GAATGCGGAA TTGAACCCAA AATTCTCATC GAGGGGCCGC CGCGCCGCGA GGTACCGATT
TTACTACGCC AGACCAGCTT TAAAGCACTG GAAGAGACGG TGTTGTTTGC GGGGCAGAAA
CAGGGCACGC ATACCGCGCG CTTTGGTGAA ATTGAGCAGC GTGGCGTGGC ATTAACGCCG
AAAGGGCGAC AACTGTATGA TGATCTTCTG CGTAACGCTG GAACCGGGCA GGATAATCTC
ACTCACCAAA TGCATTTACA GGAAACCTTC CGCACTTTTC CTGACAGTGA GTTTTTAATG
CGTCAGCAAG GGTTGGCATG GTTCCGGTAC CGTCTGACGC CTTCGGGTGA GGCGCATCGT
CAGGCGATTC ATCCTGGAGA CGATCCACAG CCCTTAATTG AACGTGGTTG GGTAGTGGCG
CAACCCATCA CCTATGAAGA TTTCTTGCCC GTTAGCGCGG CGGGGATCTT CCAGTCAAAT
CTGGGTAATG AAACGCAGAC ACGCAGTCAC GGTAATGCCA GTCGCGAAGC ATTTGAGCAG
GCGTTGGGTT GTCCGGTTTT GGATGAGTTC CAGCTTTACC AGGAAGCGGA AGAACGCAGT
AAACGTCGCT GTGGTTTGCT TTAA
|
|---|
| Protein sequence | MANSITADEI REQFSQAMSA MYQQEVPQYG TLLELVADVN LAVLENNPQL HEKMVNADEL
ARLNVERHGA IRVGTAQELA TLRRMFAIMG MYPVSYYDLS QAGVPVHSTA FRPIDDASLA
RNPFRVFTSL LRLELIENEI LRQKAAEILR QRDIFTPRCR QLLEEYEQQG GFNETQAQEF
VQEALETFRW HQSATVDEET YRALHNEHRL IADVVCFPGC HINHLTPRTL DIDRVQSMMP
ECGIEPKILI EGPPRREVPI LLRQTSFKAL EETVLFAGQK QGTHTARFGE IEQRGVALTP
KGRQLYDDLL RNAGTGQDNL THQMHLQETF RTFPDSEFLM RQQGLAWFRY RLTPSGEAHR
QAIHPGDDPQ PLIERGWVVA QPITYEDFLP VSAAGIFQSN LGNETQTRSH GNASREAFEQ
ALGCPVLDEF QLYQEAEERS KRRCGLL
|
|---|
| |