| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcDH1_2205 |
|---|
| Symbol | |
|---|
| ID | 0 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli DH1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | CP001637 |
|---|
| Strand | - |
|---|
| Start bp | 2364648 |
|---|
| End bp | 2365661 |
|---|
| Gene Length | 1014 bp |
|---|
| Protein Length | 337 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | |
|---|
| Product | ABC transporter related protein |
|---|
| Protein accession | ACX39855 |
|---|
| Protein GI | 260449433 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.0635476 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGTACG CAGTGGAGTT TGACAACGTC TCGCGGTTGT ACGGTGACGT GCGCGCAGTA
GATGGCGTCA GTATTGCGAT AAAAGATGGT GAGTTCTTCT CTATGCTGGG GCCGTCCGGC
TCCGGCAAAA CCACCTGCCT GCGCCTGATT GCTGGCTTCG AACAGCTTTC CGGCGGGGCT
ATCTCTATCT TTGGTAAACC CGCCAGCAAT CTGCCACCGT GGGAGCGGGA CGTGAATACT
GTCTTTCAGG ACTACGCGCT ATTTCCGCAT ATGTCGATTC TTGACAATGT CGCCTATGGG
CTGATGGTCA AAGGCGTGAA TAAAAAGCAG CGGCACGCAA TGGCGCAAGA GGCGCTGGAG
AAAGTGGCGT TGGGGTTTGT ACATCAACGT AAACCGTCAC AACTTTCTGG TGGTCAGCGC
CAGCGGGTTG CTATCGCCAG AGCATTGGTG AATGAACCGC GCGTATTGCT GTTGGATGAA
CCGCTCGGCG CACTGGATCT CAAATTGCGT GAGCAGATGC AGCTGGAACT GAAAAAACTG
CAACAGTCTC TCGGTATCAC TTTTATCTTC GTTACCCACG ATCAGGGCGA AGCGTTATCG
ATGTCCGATC GTGTGGCGGT TTTCAATAAT GGACGCATTG AGCAGGTCGA TTCCCCGCGC
GATCTCTATA TGCGCCCGCG CACGCCGTTT GTTGCCGGGT TCGTTGGTAC ATCGAATGTT
TTTGATGGAC TGATGGCAGA GAAACTTTGT GGCATGACGG GAAGCTTCGC CCTGCGACCG
GAACATATCC GCCTCAACAC CCCTGGTGAA CTGCAGGCCA ATGGCACGAT CCAGGCGGTG
CAATATCAGG GCGCGGCAAC TCGTTTTGAA CTGAAATTGA ACGGCGGTGA AAAACTGCTT
GTGAGTCAGG CCAATATGAC AGGCGAAGAA CTGCCTGCCA CGCTCACGCC CGGACAACAG
GTGATGGTTT CCTGGTCGCG TGATGTGATG GTGCCGCTGG TTGAGGAGAG GTGA
|
|---|
| Protein sequence | MTYAVEFDNV SRLYGDVRAV DGVSIAIKDG EFFSMLGPSG SGKTTCLRLI AGFEQLSGGA
ISIFGKPASN LPPWERDVNT VFQDYALFPH MSILDNVAYG LMVKGVNKKQ RHAMAQEALE
KVALGFVHQR KPSQLSGGQR QRVAIARALV NEPRVLLLDE PLGALDLKLR EQMQLELKKL
QQSLGITFIF VTHDQGEALS MSDRVAVFNN GRIEQVDSPR DLYMRPRTPF VAGFVGTSNV
FDGLMAEKLC GMTGSFALRP EHIRLNTPGE LQANGTIQAV QYQGAATRFE LKLNGGEKLL
VSQANMTGEE LPATLTPGQQ VMVSWSRDVM VPLVEER
|
|---|
| |