Gene EcDH1_2178 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_2178 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp2334418 
End bp2335806 
Gene Length1389 bp 
Protein Length462 aa 
Translation table11 
GC content49% 
IMG OID 
Productnitrite transporter 
Protein accessionACX39829 
Protein GI260449407 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCACTGC AAAATGAGAA AAATAGTCGT TATCTTTTGC GCGACTGGAA ACCAGAAAAT 
CCGGCCTTCT GGGAAAATAA AGGAAAACAT ATTGCTCGAA GAAATCTCTG GATATCAGTC
AGTTGTCTAC TTCTTGCCTT CTGTGTCTGG ATGCTATTTA GCGCAGTTAC CGTTAATCTC
AATAAAATCG GTTTTAATTT TACTACCGAT CAACTCTTTT TATTAACCGC ATTACCCTCC
GTTTCTGGCG CATTATTGCG TGTTCCCTAC TCCTTTATGG TGCCTATATT CGGTGGACGC
CGATGGACGG TTTTTAGTAC TGCAATCCTG ATTATTCCTT GCGTCTGGCT CGGAATTGCC
GTGCAAAATC CGAATACTCC TTTTGGGATA TTTATCGTTA TCGCTTTGCT ATGCGGTTTT
GCAGGTGCAA ACTTTGCTTC GAGCATGGGC AATATCAGTT TCTTCTTTCC AAAAGCCAAA
CAAGGGAGCG CTCTTGGGAT TAATGGCGGA TTAGGAAACT TAGGTGTAAG TGTAATGCAG
CTGGTTGCAC CGCTGGTCAT TTTTGTACCT GTATTTGCCT TTCTCGGCGT CAATGGCGTA
CCGCAGGCCG ACGGTTCGGT GATGTCGCTG GCGAATGCCG CATGGATTTG GGTACCGCTA
CTGGCGATTG CCACGATCGC CGCATGGTCA GGGATGAATG ATATCGCCAG TTCACGCGCC
TCAATTGCCG ACCAGCTCCC TGTCTTACAA CGCCTGCATC TCTGGCTGCT GAGCCTGCTT
TACCTTGCCA CCTTCGGTTC GTTTATCGGT TTTTCTGCGG GTTTTGCCAT GCTGGCAAAA
ACCCAGTTCC CGGATGTGAA TATTCTGCGC CTGGCGTTCT TTGGCCCATT TATCGGTGCC
ATCGCGCGGT CGGTTGGTGG TGCTATTTCC GATAAGTTCG GCGGCGTGCG GGTGACGTTG
ATCAACTTTA TTTTTATGGC GATTTTCAGT GCCCTGCTGT TCCTTACCTT ACCGGGCACA
GGCTCCGGTA ATTTCATCGC CTTTTACGCC GTATTTATGG GGCTGTTTCT GACTGCGGGT
CTGGGAAGTG GTTCTACTTT CCAGATGATC GCCGTCATCT TTCGCCAGAT AACCATTTAT
CGGGTAAAGA TGAAAGGCGG TAGTGATGAG CAAGCTCATA AAGAAGCCGT CACCGAAACG
GCGGCGGCTC TGGGCTTTAT CTCAGCCATT GGCGCAGTGG GCGGCTTTTT TATTCCGCAG
GCGTTTGGCA TGTCGCTCAA TATGACCGGC TCTCCGGTCG GCGCGATGAA AGTGTTTTTA
ATCTTCTACA TCGTTTGTGT GCTGCTGACC TGGCTGGTTT ATGGTCGGCG GAAGTTCAGC
CAAAAATAA
 
Protein sequence
MALQNEKNSR YLLRDWKPEN PAFWENKGKH IARRNLWISV SCLLLAFCVW MLFSAVTVNL 
NKIGFNFTTD QLFLLTALPS VSGALLRVPY SFMVPIFGGR RWTVFSTAIL IIPCVWLGIA
VQNPNTPFGI FIVIALLCGF AGANFASSMG NISFFFPKAK QGSALGINGG LGNLGVSVMQ
LVAPLVIFVP VFAFLGVNGV PQADGSVMSL ANAAWIWVPL LAIATIAAWS GMNDIASSRA
SIADQLPVLQ RLHLWLLSLL YLATFGSFIG FSAGFAMLAK TQFPDVNILR LAFFGPFIGA
IARSVGGAIS DKFGGVRVTL INFIFMAIFS ALLFLTLPGT GSGNFIAFYA VFMGLFLTAG
LGSGSTFQMI AVIFRQITIY RVKMKGGSDE QAHKEAVTET AAALGFISAI GAVGGFFIPQ
AFGMSLNMTG SPVGAMKVFL IFYIVCVLLT WLVYGRRKFS QK