Gene EcDH1_2175 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_2175 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp2331309 
End bp2332190 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content50% 
IMG OID 
Productprotein of unknown function DUF6 transmembrane 
Protein accessionACX39827 
Protein GI260449405 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.233434 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACACGAC AAAAAGCAAC GCTCATAGGG CTGATAGCGA TCGTCCTGTG GAGCACGATG 
GTAGGATTGA TTCGCGGTGT CAGTGAGGGG CTCGGCCCGG TCGGCGGCGC AGCTGCTATC
TATTCATTAA GCGGGCTGCT GTTAATCTTC ACGGTTGGAT TTCCGCGTAT TCGGCAAATC
CCGAAAGGCT ATTTACTCGC CGGGAGTCTG TTATTCGTCA GCTATGAAAT CTGTCTGGCG
CTTTCCTTAG GGTATGCGGC GACCCATCAT CAGGCGATTG AAGTGGGTAT GGTGAACTAT
CTGTGGCCCA GCCTGACAAT TCTCTTTGCC ATTCTGTTTA ATGGTCAGAA AACCAACTGG
TTGATTGTAC CTGGATTATT ATTAGCCCTC GTCGGCGTCT GTTGGGTGTT AGGCGGTGAC
AATGGGTTAC ATTATGATGA AATCATCAAT AATATCACCA CCAGCCCATT GAGTTATTTC
CTGGCGTTCA TTGGTGCGTT TATCTGGGCA GCCTATTGCA CAGTAACGAA TAAATACGCA
CGCGGATTTA ATGGAATTAC CGTTTTTGTC CTGCTAACGG GAGCAAGTCT GTGGGTTTAC
TATTTTCTTA CGCCACAACC AGAAATGATA TTTAGCACGC CCGTCATGAT TAAACTCATC
TCTGCGGCAT TTACCTTAGG ATTTGCTTAT GCTGCATGGA ATGTCGGTAT ATTGCATGGC
AATGTCACCA TTATGGCGGT AGGTTCGTAT TTTACGCCTG TACTTTCCTC AGCGCTTGCA
GCCGTGCTGC TCAGCGCCCC GCTGTCGTTC TCGTTCTGGC AAGGCGCGCT GATGGTCTGC
GGCGGTTCCC TGCTCTGCTG GCTGGCGACA CGTCGTGGTT AA
 
Protein sequence
MTRQKATLIG LIAIVLWSTM VGLIRGVSEG LGPVGGAAAI YSLSGLLLIF TVGFPRIRQI 
PKGYLLAGSL LFVSYEICLA LSLGYAATHH QAIEVGMVNY LWPSLTILFA ILFNGQKTNW
LIVPGLLLAL VGVCWVLGGD NGLHYDEIIN NITTSPLSYF LAFIGAFIWA AYCTVTNKYA
RGFNGITVFV LLTGASLWVY YFLTPQPEMI FSTPVMIKLI SAAFTLGFAY AAWNVGILHG
NVTIMAVGSY FTPVLSSALA AVLLSAPLSF SFWQGALMVC GGSLLCWLAT RRG