Gene EcDH1_2162 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_2162 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp2318568 
End bp2319464 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content53% 
IMG OID 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionACX39814 
Protein GI260449392 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.00686598 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGCTAA GCGAGGAAAC GTCCGCCGTA CGCCCACAAA AACAAACGCG ATTTAACGGT 
GCAAAACTGG TATGGATGCT GAAAGGCAGT CCGCTCACCG TGACCAGCGC AGTCATCATT
GTATTAATGC TATTGATGAT GATTTTTTCA CCGTGGCTGG CGACGCATGA TCCCAACGCC
ATTGATTTAA CCGCCCGCCT TTTGCCGCCT TCTGCGGCGC ACTGGTTTGG CACCGATGAA
GTGGGACGCG ATCTGTTTAG CCGCGTACTG GTCGGCAGTC AGCAATCAAT TCTCGCCGGA
TTAGTCGTGG TTGCCATTGC GGGTATGATT GGTTCGCTAC TCGGATGTCT ATCCGGTGTG
CTTGGTGGAC GCGCAGACGC CATCATCATG CGCATCATGG ACATTATGCT GTCGATTCCT
TCGTTGGTAC TGACAATGGC ACTGGCTGCC GCTCTCGGGC CGAGTTTGTT TAACGCCATG
CTGGCTATTG CTATTGTGCG AATTCCCTTT TATGTGCGCC TGGCGCGGGG GCAAGCATTA
GTTGTACGCC AGTATACCTA TGTTCAGGCG GCGAAAACCT TTGGCGCGTC TCGTTGGCAT
CTGATCAACT GGCATATTTT ACGTAACTCC CTACCGCCGC TGATCGTGCA GGCATCGCTG
GATATCGGTA GCGCGATTTT AATGGCCGCC ACGTTGGGAT TTATTGGCCT GGGTGCTCAA
CAACCGAGTG CTGAATGGGG CGCGATGGTA GCAAATGGTC GCAACTATGT ACTCGATCAG
TGGTGGTATT GCGCATTTCC GGGGGCAGCG ATTTTGCTTA CCGCCGTCGG GTTTAATCTC
TTTGGTGATG GTATTCGCGA TCTGCTTGAC CCGAAAGCAG GAGGAAAGCA GTCATGA
 
Protein sequence
MMLSEETSAV RPQKQTRFNG AKLVWMLKGS PLTVTSAVII VLMLLMMIFS PWLATHDPNA 
IDLTARLLPP SAAHWFGTDE VGRDLFSRVL VGSQQSILAG LVVVAIAGMI GSLLGCLSGV
LGGRADAIIM RIMDIMLSIP SLVLTMALAA ALGPSLFNAM LAIAIVRIPF YVRLARGQAL
VVRQYTYVQA AKTFGASRWH LINWHILRNS LPPLIVQASL DIGSAILMAA TLGFIGLGAQ
QPSAEWGAMV ANGRNYVLDQ WWYCAFPGAA ILLTAVGFNL FGDGIRDLLD PKAGGKQS