Gene EcDH1_2161 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_2161 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp2317549 
End bp2318571 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content55% 
IMG OID 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionACX39813 
Protein GI260449391 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.0198405 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACCTTCT GGAGTATTTT ACGCCAACGC TGCTGGGGGC TGGTGCTCGT GGTGGCGGGC 
GTCTGCGTGA TTACGTTTAT TATCTCGCAT CTGATCCCTG GTGATCCGGC GCGGTTACTG
GCGGGTGACC GCGCCAGCGA TGCTATCGTG GAAAATATTC GCCAGCAACT GGGACTGGAC
CAGCCACTGT ATGTACAGTT TTACCGCTAC GTCAGCGACC TGTTTCATGG TGACCTGGGA
ACATCCATTC GTACCGGGCG TCCGGTGCTG GAAGAGTTGC GTATATTTTT CCCGGCGACG
CTGGAGCTGG CTTTTGGTGC CCTGCTGCTG GCACTCCTGA TTGGCATCCC GCTGGGCATA
CTCTCTGCAG TCTGGCGAAA TCGCTGGCTG GATCATCTGG TGCGAATAAT GGCCATTACC
GGAATCTCCA CACCTGCGTT CTGGCTTGGG CTGGGCGTCA TTGTGCTGTT TTATGGTCAT
CTGCAAATTC TTCCCGGCGG CGGAAGGCTT GATGACTGGC TGGATCCACC AACGCACGTT
ACCGGCTTTT ATCTGCTCGA TGCGCTGCTT GAAGGCAACG GTGAAGTCTT CTTCAATGCG
TTGCAACATC TCATCTTACC GGCATTAACG CTGGCGTTCG TTCACCTGGG AATTGTCGCT
CGCCAGATCC GCTCAGCGAT GCTGGAACAA TTGAGTGAAG ACTACATTCG TACCGCCCGG
GCCAGCGGCT TGCCCGGCTG GTATATCGTT TTATGTTATG CGCTACCCAA TGCGTTGATC
CCATCGATTA CCGTATTGGG TTTGGCGCTG GGCGATTTGT TGTATGGCGC AGTGCTCACC
GAAACCGTTT TTGCCTGGCC CGGAATGGGT GCATGGGTAG TAACATCAAT ACAGGCGCTC
GACTTCCCGG CAGTGATGGG CTTTGCCGTC GTGGTTTCAT TTGCTTATGT GCTGGTCAAC
CTGGTGGTGG ATTTGCTCTA TTTGTGGATT GATCCGCGTA TCGGACGTGG AGGTGGTGAA
TGA
 
Protein sequence
MTFWSILRQR CWGLVLVVAG VCVITFIISH LIPGDPARLL AGDRASDAIV ENIRQQLGLD 
QPLYVQFYRY VSDLFHGDLG TSIRTGRPVL EELRIFFPAT LELAFGALLL ALLIGIPLGI
LSAVWRNRWL DHLVRIMAIT GISTPAFWLG LGVIVLFYGH LQILPGGGRL DDWLDPPTHV
TGFYLLDALL EGNGEVFFNA LQHLILPALT LAFVHLGIVA RQIRSAMLEQ LSEDYIRTAR
ASGLPGWYIV LCYALPNALI PSITVLGLAL GDLLYGAVLT ETVFAWPGMG AWVVTSIQAL
DFPAVMGFAV VVSFAYVLVN LVVDLLYLWI DPRIGRGGGE