Gene EcDH1_2143 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_2143 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp2290182 
End bp2290685 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content45% 
IMG OID 
ProductFimbrial protein 
Protein accessionACX39796 
Protein GI260449374 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.00578813 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAGAC TTCACAAGAG GTTCCTGTTA GCTACGTTTT GCGCGTTATT CACAGCAACT 
CTCCAGGCCG CCGATGTCAC TATCACTGTT AATGGTCGGG TAGTCGCTAA ACCCTGCACT
ATTCAAACCA AAGAAGCTAA CGTTAATCTC GGGGATCTTT ATACGCGCAA TCTGCAACAA
CCTGGTTCTG CATCTGGCTG GCACAATATT ACTTTGTCAT TAACCGATTG TCCGGTTGAA
ACAAGTGCAG TGACGGCAAT CGTGACAGGT TCAACTGACA ATACGGGTTA TTACAAAAAT
GAAGGTACTG CCGAAAATAT TCAGATAGAG CTGAGGGATG ACCAGGATGC TGCGTTAAAA
AATGGCGATA GCAAAACGGT TATTGTTGAT GAGATCACTC GTAATGCACA GTTTCCACTT
AAGGCAAGAG CTATCACGGT GAATGGAAAC GCAAGCCAGG GAACGATCGA GGCGCTAATC
AATGTGATCT ACACCTGGCA ATAA
 
Protein sequence
MKRLHKRFLL ATFCALFTAT LQAADVTITV NGRVVAKPCT IQTKEANVNL GDLYTRNLQQ 
PGSASGWHNI TLSLTDCPVE TSAVTAIVTG STDNTGYYKN EGTAENIQIE LRDDQDAALK
NGDSKTVIVD EITRNAQFPL KARAITVNGN ASQGTIEALI NVIYTWQ