Gene EcDH1_2142 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_2142 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp2289639 
End bp2290169 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content45% 
IMG OID 
ProductFimbrial protein 
Protein accessionACX39795 
Protein GI260449373 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.00278828 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATACA ATAACATTAT TTTCCTCGGT TTATGTCTGG GGTTAACCAC CTATTCTGCT 
TTATCCGCAG ATAGCGTTAT TAAAATTAGC GGGCGCGTCC TCGATTATGG CTGCACAGTC
TCATCGGATT CGCTTAATTT TACCGTAGAT CTCCAAAAAA ACAGTGCCAG ACAATTTCCA
ACGACCGGTA GCACAAGTCC AGCCGTCCCT TTTCAGATTA CGTTAAGTGA ATGCAGCAAA
GGGACAACGG GGGTTCGGGT TGCATTTAAC GGTATTGAGG ATGCAGAAAA TAATACTTTG
TTGAAACTGG ATGAAGGAAG CAATACGGCC TCCGGTTTGG GTATAGAAAT ATTGGACGCA
AATATGCGTC CGGTGAAACT GAATGATCTT CATGCCGGGA TGCAGTGGAT CCCACTGGTA
CCAGAACAGA ACAATATTTT GCCTTACTCC GCTCGTCTGA AGTCAACTCA GAAGTCCGTC
AATCCGGGAC TGGTGAGGGC TTCGGCAACC TTTACCCTTG AATTTCAATA A
 
Protein sequence
MKYNNIIFLG LCLGLTTYSA LSADSVIKIS GRVLDYGCTV SSDSLNFTVD LQKNSARQFP 
TTGSTSPAVP FQITLSECSK GTTGVRVAFN GIEDAENNTL LKLDEGSNTA SGLGIEILDA
NMRPVKLNDL HAGMQWIPLV PEQNNILPYS ARLKSTQKSV NPGLVRASAT FTLEFQ