Gene EcDH1_2133 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_2133 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp2275453 
End bp2276988 
Gene Length1536 bp 
Protein Length511 aa 
Translation table11 
GC content53% 
IMG OID 
ProductABC transporter related protein 
Protein accessionACX39788 
Protein GI260449366 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.0375585 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAACGA GTGATACCCG CGCGTTACCG CTACTTTGCG CCCGCTCGGT TTATAAACAG 
TATTCAGGGG TCAATGTCCT GAAAGGCATC GATTTTACGT TGCATCAGGG GGAGGTCCAC
GCCCTGCTCG GCGGCAATGG TGCCGGTAAA TCGACGTTAA TGAAGATTAT TGCCGGTATT
ACCCCTGCTG ATAGCGGTAC GCTGGAGATT GAGGGCAACA ACTACGTCAG ATTAACGCCA
GTTCATGCTC ATCAGCTGGG TATTTATCTC GTTCCCCAGG AACCGCTGCT TTTCCCAAGC
CTGTCGATAA AAGAAAACAT CCTGTTTGGG CTGGCAAAAA AACAGCTCTC CATGCAGAAA
ATGAAGAACT TGCTGGCGGC GCTGGGCTGC CAGTTTGATC TGCATAGTCT GGCAGGATCG
CTGGATGTCG CCGATCGCCA AATGGTGGAA ATCCTCCGCG GGCTGATGCG CGACTCGCGG
ATTCTGATCC TCGATGAACC TACCGCCTCG CTTACCCCTG CGGAAACCGA ACGCTTGTTT
AGTCGCTTGC AAGAGCTGCT TGCTACTGGC GTGGGTATTG TTTTTATCTC GCATAAGCTG
CCGGAAATTC GCCAGATTGC CGATCGAATT AGCGTGATGC GCGACGGAAC CATCGCCTTA
AGCGGCAAAA CCAGCGAACT GTCTACCGAC GACATTATTC AGGCCATCAC CCCAGCGGTA
CGGGAAAAAT CGCTCTCTGC CAGCCAAAAA TTATGGCTGG AGTTACCTGG TAACCGCCCA
CAACATGCCG CCGGAACGCC GGTGCTGACA CTGGAAAATC TGACCGGCGA AGGTTTCAGG
AATGTCAGCC TGACGCTCAA TGCCGGAGAA ATTCTGGGCC TGGCTGGGCT GGTGGGGGCC
GGACGCACAG AACTGGCCGA GACGCTCTAT GGTCTGCGTA CTTTGCGTGG CGGACGCATT
ATGCTGAATG GTAAAGAGAT CAATAAATTA TCCACTGGAG AACGTTTACT GCGCGGTCTG
GTTTATCTGC CGGAAGATCG CCAGTCATCC GGACTGAATC TCGATGCTTC GCTGGCCTGG
AACGTCTGCG CCCTTACTCA TAACCTTCGT GGATTCTGGG CGAAAACCGC GAAAGATAAT
GCCACCCTGG AACGTTATCG TCGGGCGCTG AATATTAAAT TCAACCAACC GGAACAAGCT
GCACGGACAT TATCCGGTGG CAACCAGCAA AAAATCCTCA TTGCCAAATG CTTGGAAGCT
TCGCCGCAAG TATTGATTGT CGATGAGCCG ACGCGCGGCG TGGATGTCTC GGCCCGTAAT
GATATCTACC AGCTGTTGCG CAGCATCGCC GCACAAAATG TGGCTGTGCT GCTTATCTCC
TCCGACCTGG AAGAGATCGA ACTGATGGCA GATCGTGTGT ATGTGATGCA TCAGGGCGAA
ATTACCCACT CTGCACTGAC CGAGCGCGAT ATTAATGTCG AGACTATTAT GCGCGTTGCC
TTCGGCGATA GTCAGCGTCA GGAGGCGTCA TGCTGA
 
Protein sequence
MQTSDTRALP LLCARSVYKQ YSGVNVLKGI DFTLHQGEVH ALLGGNGAGK STLMKIIAGI 
TPADSGTLEI EGNNYVRLTP VHAHQLGIYL VPQEPLLFPS LSIKENILFG LAKKQLSMQK
MKNLLAALGC QFDLHSLAGS LDVADRQMVE ILRGLMRDSR ILILDEPTAS LTPAETERLF
SRLQELLATG VGIVFISHKL PEIRQIADRI SVMRDGTIAL SGKTSELSTD DIIQAITPAV
REKSLSASQK LWLELPGNRP QHAAGTPVLT LENLTGEGFR NVSLTLNAGE ILGLAGLVGA
GRTELAETLY GLRTLRGGRI MLNGKEINKL STGERLLRGL VYLPEDRQSS GLNLDASLAW
NVCALTHNLR GFWAKTAKDN ATLERYRRAL NIKFNQPEQA ARTLSGGNQQ KILIAKCLEA
SPQVLIVDEP TRGVDVSARN DIYQLLRSIA AQNVAVLLIS SDLEEIELMA DRVYVMHQGE
ITHSALTERD INVETIMRVA FGDSQRQEAS C