| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcDH1_2125 |
|---|
| Symbol | |
|---|
| ID | 0 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli DH1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | CP001637 |
|---|
| Strand | + |
|---|
| Start bp | 2267798 |
|---|
| End bp | 2269249 |
|---|
| Gene Length | 1452 bp |
|---|
| Protein Length | 483 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | |
|---|
| Product | Mannitol dehydrogenase domain protein |
|---|
| Protein accession | ACX39780 |
|---|
| Protein GI | 260449358 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.048093 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAAAACAC TAAATCGTCG CGATTTTCCC GGTGCACAGT ATCCAGAACG TATCATTCAG
TTTGGTGAAG GTAACTTCCT GCGCGCCTTT GTTGACTGGC AAATCGATCT CCTGAATGAG
CACACCGATC TGAATTCTGG CGTGGTCGTT GTTCGTCCGA TTGAAACTTC ATTCCCGCCG
TCACTGAGCA CGCAGGATGG TCTGTACACC ACCATTATCC GTGGCCTGAA TGAGAAGGGG
GAAGCGGTCA GCGACGCGCG TCTGATTCGC TCGGTTAATC GTGAAATCAG CGTCTACAGT
GAATACGATG AATTCCTGAA ACTGGCGCAC AACCCGGAAA TGCGCTTTGT TTTCTCTAAC
ACCACCGAAG CGGGTATCAG CTACCATGCG GGCGATAAAT TCGATGACGC GCCAGCGGTA
AGCTATCCGG CAAAACTGAC CCGTCTGCTG TTCGAACGCT TTAGCCATTT CAACGGTGCG
CTGGATAAAG GTTGGATCAT CATTCCGTGT GAGTTGATTG ACTACAATGG CGACGCGTTG
CGTGAACTGG TGCTGCGCTA TGCGCAAGAG TGGGCACTGC CAGAAGCATT TATTCAATGG
CTGGATCAGG CTAACAGCTT CTGTTCTACG CTGGTGGACC GTATCGTTAC CGGTTATCCG
CGCGATGAAG TGGCTAAACT GGAAGAAGAA CTGGGTTATC ACGATGGTTT TCTCGACACC
GCTGAACACT TTTACCTGTT TGTGATTCAG GGACCGAAAT CCTTAGCGAC TGAACTGCGT
CTGGACAAAT ATCCGCTCAA CGTGCTGATT GTTGACGATA TTAAACCGTA CAAAGAACGC
AAAGTGGCAA TCCTCAACGG TGCGCACACC GCGCTGGTGC CGGTGGCGTT CCAGGCAGGG
CTGGATACCG TAGGTGAAGC GATGAACGAT GCTGAAATTT GCGCATTCGT TGAAAAAGCT
ATCTACGAAG AAATTATTCC GGTACTGGAT TTGCCTCGTG ATGAACTGGA ATCTTTCGCC
AGTGCAGTCA CCGGGCGTTT CCGTAACCCG TACATTAAGC ATCAGCTGCT GTCTATCGCG
CTCAACGGTA TGACCAAGTT CCGCACCCGC ATCCTGCCAC AGCTGCTGGC AGGGCAGAAG
GCAAACGGCA CACTTCCGGC GCGCCTTACT TTCGCATTAG CGGCATTGAT TGCGTTCTAT
CGTGGTGAGC GTAACGGCGA AACATATCCG GTACAGGACG ATGCACACTG GCTGGAACGT
TATCAGCAAC TCTGGAGCCA GCATCGTGAC CGTGTTATCG GCACCCAGGA ACTGGTAGCG
ATTGTTTTGG CAGAAAAAGA CCACTGGGAG CAGGACCTGA CGCAAGTGCC TGGTCTGGTC
GAGCAGGTTG CTAATGACCT GGATGCGATT CTCGAAAAAG GGATGCGCGA AGCTGTACGT
CCGTTGTGCT AA
|
|---|
| Protein sequence | MKTLNRRDFP GAQYPERIIQ FGEGNFLRAF VDWQIDLLNE HTDLNSGVVV VRPIETSFPP
SLSTQDGLYT TIIRGLNEKG EAVSDARLIR SVNREISVYS EYDEFLKLAH NPEMRFVFSN
TTEAGISYHA GDKFDDAPAV SYPAKLTRLL FERFSHFNGA LDKGWIIIPC ELIDYNGDAL
RELVLRYAQE WALPEAFIQW LDQANSFCST LVDRIVTGYP RDEVAKLEEE LGYHDGFLDT
AEHFYLFVIQ GPKSLATELR LDKYPLNVLI VDDIKPYKER KVAILNGAHT ALVPVAFQAG
LDTVGEAMND AEICAFVEKA IYEEIIPVLD LPRDELESFA SAVTGRFRNP YIKHQLLSIA
LNGMTKFRTR ILPQLLAGQK ANGTLPARLT FALAALIAFY RGERNGETYP VQDDAHWLER
YQQLWSQHRD RVIGTQELVA IVLAEKDHWE QDLTQVPGLV EQVANDLDAI LEKGMREAVR
PLC
|
|---|
| |