Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcDH1_2120 |
Symbol | |
ID | 0 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli DH1 |
Kingdom | Bacteria |
Replicon accession | CP001637 |
Strand | - |
Start bp | 2262793 |
End bp | 2263674 |
Gene Length | 882 bp |
Protein Length | 293 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | |
Product | transcriptional regulator, LysR family |
Protein accession | ACX39775 |
Protein GI | 260449353 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.0296049 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATCTGA CCCAACTGGA GATGTTCAAC GCGGTTGCCG AAGCTGGCAG CATAACCCAG GCTGCAGCAA AAGTGCATCG CGTGCCGTCG AATCTCACTA CCCGTCTGCG CCAGCTGGAA ACAGAACTGG GGGTTGATCT GTTTATTCGC GAGAATCAGC GTTTACGTCT CTCTCCTGCC GGGCATAACT TTTTACGCTA TAGCCAACAA ATTCTCGCGT TAGTGGATGA AGCGCGGAGC GTTGTCGCTG GCGATGAGCC GCAAGGTTTA TTTTCTCTTG GTTCGCTGGA AAGCACCGCT GCAGTGCGCA TTCCAGCCAC GCTGGCGGAA TTCAACCGTC GTTATCCCAA AATTCAGTTT TCACTTTCCA CCGGCCCTTC CGGCACTATG CTGGATGGTG TACTGGAGGG AAAACTGAAT GCGGCGTTTA TTGATGGACC CATTAACCAT ACTGCCATCG ACGGGATACC GGTATACCGC GAGGAACTGA TGATCGTCAC GCCACAAGGA TATGCGCCAG TAACCCGTGC CAGTCAGGTT AATGGCAGTA ACATTTATGC CTTCCGCGCC AATTGTTCGT ATCGTCGCCA CTTCGAGAGC TGGTTTCATG CTGACGGTGC CGCTCCGGGA ACTATCCATG AGATGGAGTC TTATCACGGA ATGTTGGCCT GTGTGATCGC AGGAGCAGGC ATTGCGCTTA TTCCGCGCTC TATGCTGGAA AGTATGCCGG GGCATCACCA GGTTGAAGCG TGGCCGTTAG CTGAGCAATG GCGTTGGTTA ACAACCTGGC TGGTCTGGCG TCGTGGTGCG AAAACACGTC CGCTCGAGGC ATTTATTCAA CTGCTGGATG TGCCTGACTC GGCAAGACAG GGATATCAAT GA
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Protein sequence | MDLTQLEMFN AVAEAGSITQ AAAKVHRVPS NLTTRLRQLE TELGVDLFIR ENQRLRLSPA GHNFLRYSQQ ILALVDEARS VVAGDEPQGL FSLGSLESTA AVRIPATLAE FNRRYPKIQF SLSTGPSGTM LDGVLEGKLN AAFIDGPINH TAIDGIPVYR EELMIVTPQG YAPVTRASQV NGSNIYAFRA NCSYRRHFES WFHADGAAPG TIHEMESYHG MLACVIAGAG IALIPRSMLE SMPGHHQVEA WPLAEQWRWL TTWLVWRRGA KTRPLEAFIQ LLDVPDSARQ GYQ
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