Gene EcDH1_2120 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_2120 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp2262793 
End bp2263674 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content54% 
IMG OID 
Producttranscriptional regulator, LysR family 
Protein accessionACX39775 
Protein GI260449353 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.0296049 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATCTGA CCCAACTGGA GATGTTCAAC GCGGTTGCCG AAGCTGGCAG CATAACCCAG 
GCTGCAGCAA AAGTGCATCG CGTGCCGTCG AATCTCACTA CCCGTCTGCG CCAGCTGGAA
ACAGAACTGG GGGTTGATCT GTTTATTCGC GAGAATCAGC GTTTACGTCT CTCTCCTGCC
GGGCATAACT TTTTACGCTA TAGCCAACAA ATTCTCGCGT TAGTGGATGA AGCGCGGAGC
GTTGTCGCTG GCGATGAGCC GCAAGGTTTA TTTTCTCTTG GTTCGCTGGA AAGCACCGCT
GCAGTGCGCA TTCCAGCCAC GCTGGCGGAA TTCAACCGTC GTTATCCCAA AATTCAGTTT
TCACTTTCCA CCGGCCCTTC CGGCACTATG CTGGATGGTG TACTGGAGGG AAAACTGAAT
GCGGCGTTTA TTGATGGACC CATTAACCAT ACTGCCATCG ACGGGATACC GGTATACCGC
GAGGAACTGA TGATCGTCAC GCCACAAGGA TATGCGCCAG TAACCCGTGC CAGTCAGGTT
AATGGCAGTA ACATTTATGC CTTCCGCGCC AATTGTTCGT ATCGTCGCCA CTTCGAGAGC
TGGTTTCATG CTGACGGTGC CGCTCCGGGA ACTATCCATG AGATGGAGTC TTATCACGGA
ATGTTGGCCT GTGTGATCGC AGGAGCAGGC ATTGCGCTTA TTCCGCGCTC TATGCTGGAA
AGTATGCCGG GGCATCACCA GGTTGAAGCG TGGCCGTTAG CTGAGCAATG GCGTTGGTTA
ACAACCTGGC TGGTCTGGCG TCGTGGTGCG AAAACACGTC CGCTCGAGGC ATTTATTCAA
CTGCTGGATG TGCCTGACTC GGCAAGACAG GGATATCAAT GA
 
Protein sequence
MDLTQLEMFN AVAEAGSITQ AAAKVHRVPS NLTTRLRQLE TELGVDLFIR ENQRLRLSPA 
GHNFLRYSQQ ILALVDEARS VVAGDEPQGL FSLGSLESTA AVRIPATLAE FNRRYPKIQF
SLSTGPSGTM LDGVLEGKLN AAFIDGPINH TAIDGIPVYR EELMIVTPQG YAPVTRASQV
NGSNIYAFRA NCSYRRHFES WFHADGAAPG TIHEMESYHG MLACVIAGAG IALIPRSMLE
SMPGHHQVEA WPLAEQWRWL TTWLVWRRGA KTRPLEAFIQ LLDVPDSARQ GYQ