Gene EcDH1_2116 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_2116 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp2258924 
End bp2259358 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content49% 
IMG OID 
Producttranscriptional regulator, MarR family 
Protein accessionACX39771 
Protein GI260449349 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.00000643944 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAAAGTA CCAGCGATCT GTTCAATGAA ATTATTCCAT TGGGTCGCTT AATCCATATG 
GTTAATCAGA AGAAAGATCG CCTGCTTAAC GAGTATCTGT CTCCGCTGGA TATTACCGCG
GCACAGTTTA AGGTGCTCTG CTCTATCCGC TGCGCGGCGT GTATTACTCC GGTTGAACTG
AAAAAGGTAT TGTCGGTCGA CCTGGGAGCA CTGACCCGTA TGCTGGATCG CCTGGTCTGT
AAAGGCTGGG TGGAAAGGTT GCCGAACCCG AATGACAAGC GCGGCGTACT GGTAAAACTT
ACCACCGGCG GCGCGGCAAT ATGTGAACAA TGCCATCAAT TAGTTGGCCA GGACCTGCAC
CAAGAATTAA CAAAAAACCT GACGGCGGAC GAAGTGGCAA CACTTGAGTA TTTGCTTAAG
AAAGTCCTGC CGTAA
 
Protein sequence
MKSTSDLFNE IIPLGRLIHM VNQKKDRLLN EYLSPLDITA AQFKVLCSIR CAACITPVEL 
KKVLSVDLGA LTRMLDRLVC KGWVERLPNP NDKRGVLVKL TTGGAAICEQ CHQLVGQDLH
QELTKNLTAD EVATLEYLLK KVLP