Gene EcDH1_2113 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_2113 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp2257341 
End bp2258240 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content50% 
IMG OID 
Productprotein of unknown function DUF6 transmembrane 
Protein accessionACX39768 
Protein GI260449346 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0000340267 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGCGAA AAGATGGGGT GTTGGCGCTA CTGGTAGTGG TCGTATGGGG GCTAAATTTT 
GTGGTCATCA AAGTGGGGCT TCATAACATG CCACCGCTGA TGCTGGCCGG TTTGCGCTTT
ATGCTGGTCG CTTTTCCGGC TATCTTTTTT GTCGCACGAC CGAAAGTACC ACTGAATTTG
CTGCTGGGGT ATGGATTAAC CATCAGTTTT GCGCAGTTTG CTTTTCTTTT TTGTGCCATT
AACTTCGGTA TGCCTGCTGG ACTGGCTTCG CTGGTGTTAC AGGCACAGGC GTTTTTTACT
ATCATGCTTG GCGCGTTTAC TTTCGGGGAG CGACTGCATG GCAAACAATT GGCGGGGATC
GCCTTAGCGA TTTTTGGCGT ACTGGTGTTA ATCGAAGATA GTCTGAACGG TCAGCATGTG
GCGATGCTCG GCTTTATGTT GACCCTGGCG GCAGCATTTA GTTGGGCGTG TGGCAACATC
TTCAATAAAA AGATCATGTC GCACTCAACG CGTCCGGCGG TGATGTCGCT GGTAATCTGG
AGCGCTTTAA TCCCAATCAT TCCCTTCTTT GTTGCCTCGC TGATTCTCGA TGGTTCCGCA
ACCATGATTC ACAGTCTGGT TACTATCGAT ATGACCACCA TCTTGTCTCT GATGTATCTG
GCGTTTGTGG CGACAATTGT TGGTTATGGG ATCTGGGGGA CGTTACTGGG ACGCTATGAA
ACCTGGCGGG TTGCACCGTT ATCGTTACTG GTGCCCGTAG TAGGACTGGC AAGTGCGGCA
CTATTGTTGG ATGAACGCTT AACGGGTCTG CAATTTTTAG GTGCGGTGCT CATTATGACC
GGGCTGTATA TCAATGTATT TGGCTTGCGG TGGCGTAAAG CGGTAAAGGT GGGAAGTTAA
 
Protein sequence
MSRKDGVLAL LVVVVWGLNF VVIKVGLHNM PPLMLAGLRF MLVAFPAIFF VARPKVPLNL 
LLGYGLTISF AQFAFLFCAI NFGMPAGLAS LVLQAQAFFT IMLGAFTFGE RLHGKQLAGI
ALAIFGVLVL IEDSLNGQHV AMLGFMLTLA AAFSWACGNI FNKKIMSHST RPAVMSLVIW
SALIPIIPFF VASLILDGSA TMIHSLVTID MTTILSLMYL AFVATIVGYG IWGTLLGRYE
TWRVAPLSLL VPVVGLASAA LLLDERLTGL QFLGAVLIMT GLYINVFGLR WRKAVKVGS