Gene EcDH1_2086 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_2086 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp2236924 
End bp2237139 
Gene Length216 bp 
Protein Length71 aa 
Translation table11 
GC content35% 
IMG OID 
Productcold-shock DNA-binding domain protein 
Protein accessionACX39742 
Protein GI260449320 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.000534295 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAAATA AAATGACTGG TTTAGTAAAA TGGTTTAACG CTGATAAAGG TTTCGGCTTT 
ATTTCTCCTG TTGATGGTAG TAAAGATGTG TTTGTGCATT TTTCTGCGAT TCAGAATGAT
AATTATCGAA CCTTATTTGA AGGTCAAAAG GTTACCTTCT CTATAGAGAG TGGTGCTAAA
GGTCCTGCAG CAGCAAATGT CATCATTACT GATTAA
 
Protein sequence
MSNKMTGLVK WFNADKGFGF ISPVDGSKDV FVHFSAIQND NYRTLFEGQK VTFSIESGAK 
GPAAANVIIT D