Gene EcDH1_2084 details

Gene Information

• Locus tag: EcDH1_2084
• ID: 0
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Escherichia coli DH1
• Kingdom: Bacteria
• Replicon accession: CP001637
• Strand: +
• Start bp: 2235237
• End bp: 2235989
• Gene Length: 753 bp
• Protein Length: 250 aa
• Translation table: 11
• GC content: 48%
• Product: antitermination protein
• Protein accession: ACX39740
• Protein GI: 260449318

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.000058866
• Plasmid hitchhiking: No
• Plasmid clonability: decreased coverage

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAACCTTG AAGCCTTACC AAAATATTAC TCCCCAAAAT CTCCAAAATT GAGCGATGAC 
GCTCCAGCGA CAGGCACCGG TTGTTTAACA ATTACGGATG TAATGGCAGC GCAGGGGATG 
GTGCAGTCGA AAGCACCACT TGGGTTGGCC TTATTTCTGG CAAAAGTTGG TGTTCAGGAC 
CCTCAGTTTG CGATTGAAGG CCTGCTAAAT TACGCGATGG CACTGGATAA CCCGACATTG 
AACAAATTGA GTGAAGAAAT CCGGTTACAG ATTATTCCTT ACCTCGTGAG TTTTGCCTTT 
GCTGATTACT CCAGGTCTGC GGCAAGTAAG GCTCGCTGTG AGCATTGTTC AGGTACGGGA 
TTTTATAATG TATTGCGCGA AGTGGTGAAA CACTACAGAC GCGGGGAATC TGTAATCAAG 
GAAGAATGGG TGAAGGAACT ATGTCAGCAT TGCCATGGTA AGGGCGAAGC CAGCACAGCG 
TGCAGAGGGT GTAAGGGTAA AGGGATTGTT CTGGATGAAA AAAGAACCCG GTTTCATGGC 
GTACCGGTAT ATAAGATTTG TGGGCGTTGT AATGGAAACC GGTTTAGTCG TTTACCGACC 
ACGCTGGCAC GACGTCATGT CCAGAAGCTG GTACCAGACC TGACCGATTA TCAGTGGTAT 
AAGGGGTATG CGGACGTCAT TGGTAAACTG GTAACAAAGT GCTGGCAGGA AGAAGCATAC 
GCGGAAGCGC AATTGAGGAA GGTGACGAGA TAA 

 

Protein sequence

MNLEALPKYY SPKSPKLSDD APATGTGCLT ITDVMAAQGM VQSKAPLGLA LFLAKVGVQD 
PQFAIEGLLN YAMALDNPTL NKLSEEIRLQ IIPYLVSFAF ADYSRSAASK ARCEHCSGTG 
FYNVLREVVK HYRRGESVIK EEWVKELCQH CHGKGEASTA CRGCKGKGIV LDEKRTRFHG 
VPVYKICGRC NGNRFSRLPT TLARRHVQKL VPDLTDYQWY KGYADVIGKL VTKCWQEEAY 
AEAQLRKVTR