Gene EcDH1_2048 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_2048 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp2208886 
End bp2209779 
Gene Length894 bp 
Protein Length297 aa 
Translation table11 
GC content53% 
IMG OID 
Producttranscriptional regulator, LysR family 
Protein accessionACX39705 
Protein GI260449283 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATATTG AACTTCGTCA TCTGCGTTAC TTTGTTGCTG TTGCGGAAGA GCTGCATTTC 
GGGCGCGCCG CTGCCCGCCT GAATATTTCG CAACCGCCGC TAAGTCAGCA GATTCAGGCG
CTGGAGCAAC AAATTGGTGC CCGACTGCTG GCACGAACCA ATCGCAGTGT ATTGCTGACG
GCAGCAGGAA AACAGTTTCT TGCAGATAGT CGGCAAATCC TGTCTATGGT GGATGACGCT
GCCGCTCGCG CTGAAAGGCT GCATCAGGGT GAAGCGGGGG AGTTGCGCAT TGGTTTTACT
TCGTCGGCTC CTTTTATTCG GGCGGTGTCC GATACGTTAT CGCTGTTTCG CCGTGATTAT
CCTGATGTCC ATTTACAAAC CCGCGAAATG AACACTCGCG AGCAAATCGC TCCGCTCATT
GAAGGAACGC TGGATATGGG ATTGCTGCGT AACACAGCGT TACCGGAGTC GCTTGAACAC
GCAGTCATCG TCCATGAACC GCTTATGGCG ATGATCCCGC ACGATCATCC CCTGGCAAAT
AACCCGAATG TAACGCTGGC TGAACTGGCG AAAGAACCCT TTGTCTTTTT TGATCCGCAC
GTCGGGACAG GGCTGTATGA CGATATTCTC GGGCTGATGC GACGTTACCA TTTGACGCCC
GTCATCACTC AGGAGGTGGG CGAGGCAATG ACCATCATCG GTCTGGTTTC CGCCGGTCTG
GGTGTTTCAA TTTTGCCTGC GTCATTTAAA CGTGTTCAGC TCAACGAAAT GCGCTGGGTG
CCGATTGCTG AAGAGGATGC GGTTTCTGAA ATGTGGTTGG TCTGGCCGAA ACATCATGAA
CAAAGTCCGG CTGCGCGTAA CTTTCGTATT CATCTGCTGA ATGCTCTCAG GTGA
 
Protein sequence
MNIELRHLRY FVAVAEELHF GRAAARLNIS QPPLSQQIQA LEQQIGARLL ARTNRSVLLT 
AAGKQFLADS RQILSMVDDA AARAERLHQG EAGELRIGFT SSAPFIRAVS DTLSLFRRDY
PDVHLQTREM NTREQIAPLI EGTLDMGLLR NTALPESLEH AVIVHEPLMA MIPHDHPLAN
NPNVTLAELA KEPFVFFDPH VGTGLYDDIL GLMRRYHLTP VITQEVGEAM TIIGLVSAGL
GVSILPASFK RVQLNEMRWV PIAEEDAVSE MWLVWPKHHE QSPAARNFRI HLLNALR