Gene EcDH1_2047 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_2047 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp2207526 
End bp2208779 
Gene Length1254 bp 
Protein Length417 aa 
Translation table11 
GC content53% 
IMG OID 
Productmajor facilitator superfamily MFS_1 
Protein accessionACX39704 
Protein GI260449282 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.349329 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGCCGTA CTACAACTGT TGATGGCGCT CCGGCAAGCG ACACTGACAA GCAAAGCATT 
TCTCAGCCAA ATCAATTTAT TAAACGCGGT ACGCCGCAAT TTATGCGCGT CACCCTGGCG
CTGTTCTCTG CCGGACTGGC AACATTTGCA CTTCTCTATT GTGTGCAGCC TATCCTTCCG
GTGCTTTCGC AGGAGTTTGG CTTAACCCCC GCGAACAGTA GTATTTCACT GTCCATTTCC
ACGGCGATGT TGGCTATTGG TTTGCTGTTT ACTGGCCCGC TATCCGATGC CATTGGTCGC
AAACCAGTGA TGGTCACGGC GCTACTGTTG GCCTCCATTT GTACGTTACT TTCGACAATG
ATGACCAGCT GGCACGGCAT TTTGATTATG CGCGCCTTGA TTGGGCTTTC GTTAAGTGGC
GTGGCAGCTG TTGGCATGAC TTATCTTAGC GAGGAAATCC ATCCCAGTTT CGTGGCCTTT
TCAATGGGGT TGTATATCAG CGGCAACTCA ATTGGCGGCA TGAGCGGACG CTTAATTAGC
GGTGTCTTCA CGGACTTTTT CAACTGGCGA ATTGCTCTGG CGGCAATCGG TTGTTTCGCG
CTGGCCTCGG CGTTGATGTT CTGGAAAATC CTCCCTGAAT CACGCCATTT TCGCCCGACT
TCGCTGCGCC CTAAGACGTT GTTTATCAAC TTTCGTCTGC ACTGGCGTGA CCGGGGATTA
CCGTTATTGT TCGCAGAAGG CTTTTTGCTG ATGGGGTCGT TCGTCACGCT GTTTAATTAC
ATCGGCTATC GGTTGATGCT CTCCCCCTGG CATGTCAGTC AGGCCGTGGT TGGCTTATTA
TCGCTGGCTT ATTTGACCGG TACATGGAGC TCACCCAAAG CCGGAACCAT GACCACCCGC
TATGGGCGTG GTCCAGTGAT GTTGTTTTCG ACGGGGGTTA TGCTGTTTGG TTTACTGATG
ACCTTATTCA GCTCGCTGTG GCTGATCTTT GCCGGAATGT TACTCTTCTC AGCAGGATTC
TTCGCAGCCC ACTCAGTAGC CAGCAGCTGG ATCGGCCCCC GCGCAAAACG CGCTAAAGGC
CAGGCCTCCT CGCTGTATCT GTTCAGTTAC TATCTGGGGT CGAGTATTGC CGGGACGCTG
GGTGGTGTTT TCTGGCATAA CTATGGCTGG AACGGCGTCG GCGCATTTAT TGCTCTGATG
CTGGTCATTG CTCTGCTGGT CGGGACGCGT TTGCATCGTC GTCTGCACGC CTGA
 
Protein sequence
MSRTTTVDGA PASDTDKQSI SQPNQFIKRG TPQFMRVTLA LFSAGLATFA LLYCVQPILP 
VLSQEFGLTP ANSSISLSIS TAMLAIGLLF TGPLSDAIGR KPVMVTALLL ASICTLLSTM
MTSWHGILIM RALIGLSLSG VAAVGMTYLS EEIHPSFVAF SMGLYISGNS IGGMSGRLIS
GVFTDFFNWR IALAAIGCFA LASALMFWKI LPESRHFRPT SLRPKTLFIN FRLHWRDRGL
PLLFAEGFLL MGSFVTLFNY IGYRLMLSPW HVSQAVVGLL SLAYLTGTWS SPKAGTMTTR
YGRGPVMLFS TGVMLFGLLM TLFSSLWLIF AGMLLFSAGF FAAHSVASSW IGPRAKRAKG
QASSLYLFSY YLGSSIAGTL GGVFWHNYGW NGVGAFIALM LVIALLVGTR LHRRLHA