Gene EcDH1_2011 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_2011 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp2168278 
End bp2169336 
Gene Length1059 bp 
Protein Length352 aa 
Translation table11 
GC content53% 
IMG OID 
Productelectron transport complex, RnfABCDGE type, D subunit 
Protein accessionACX39668 
Protein GI260449246 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.000875517 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTATTCA GAATAGCTAG CTCCCCTTAT ACCCATAACC AGCGCCAGAC ATCGCGCATT 
ATGCTGTTGG TGTTGCTCGC AGCCGTGCCA GGAATCGCAG CGCAACTGTG GTTTTTTGGT
TGGGGTACTC TCGTTCAGAT CCTGTTGGCA TCGGTTAGTG CTCTGTTAGC CGAAGCTCTC
GTACTCAAAC TACGCAAGCA GTCGGTAGCC GCAACGTTGA AAGATAACTC AGCATTGCTG
ACAGGCTTAT TGCTGGCGGT AAGTATTCCC CCCCTCGCGC CATGGTGGAT GGTCGTGCTG
GGTACGGTGT TTGCGGTGAT CATCGCTAAA CAGTTGTATG GCGGTCTGGG ACAAAACCCG
TTTAATCCGG CAATGATTGG TTATGTGGTC TTACTGATCT CCTTCCCCGT GCAGATGACC
AGCTGGTTAC CGCCACATGA AATTGCGGTC AACATCCCTG GTTTTATCGA CGCCATCCAG
GTTATTTTTA GCGGTCATAC CGCCAGTGGT GGTGATATGA ACACACTACG CTTAGGTATT
GATGGCATTA GTCAGGCGAC ACCGCTGGAT ACATTTAAAA CCTCTGTCCG TGCCGGTCAT
TCGGTTGAAC AGATTATGCA ATATCCGATC TACAGCGGTA TTCTGGCGGG CGCTGGTTGG
CAATGGGTAA ATCTCGCCTG GCTGGCTGGC GGCGTATGGT TGCTATGGCA GAAAGCGATT
CGCTGGCATA TTCCCCTCAG CTTCTTAGTA ACGCTGGCGT TATGCGCAAT GTTGGGCTGG
TTGTTCTCAC CAGAAACACT GGCAGCACCG CAAATTCATC TGCTGTCTGG AGCGACCATG
CTCGGCGCAT TCTTTATTTT GACTGACCCG GTTACCGCTT CTACGACCAA TCGTGGTCGT
CTTATTTTCG GCGCGCTTGC GGGCTTATTA GTCTGGTTGA TCCGCAGTTT CGGCGGCTAT
CCTGACGGCG TGGCTTTTGC CGTCCTGCTG GCGAACATCA CGGTTCCTCT GATCGATTAC
TACACGCGTC CGCGCGTCTA CGGCCATCGC AAAGGGTAA
 
Protein sequence
MVFRIASSPY THNQRQTSRI MLLVLLAAVP GIAAQLWFFG WGTLVQILLA SVSALLAEAL 
VLKLRKQSVA ATLKDNSALL TGLLLAVSIP PLAPWWMVVL GTVFAVIIAK QLYGGLGQNP
FNPAMIGYVV LLISFPVQMT SWLPPHEIAV NIPGFIDAIQ VIFSGHTASG GDMNTLRLGI
DGISQATPLD TFKTSVRAGH SVEQIMQYPI YSGILAGAGW QWVNLAWLAG GVWLLWQKAI
RWHIPLSFLV TLALCAMLGW LFSPETLAAP QIHLLSGATM LGAFFILTDP VTASTTNRGR
LIFGALAGLL VWLIRSFGGY PDGVAFAVLL ANITVPLIDY YTRPRVYGHR KG