Gene EcDH1_2008 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_2008 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp2166320 
End bp2166955 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content49% 
IMG OID 
Productendonuclease III 
Protein accessionACX39665 
Protein GI260449243 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.00632932 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAAAG CAAAACGCCT GGAGATCCTC ACTCGCCTGC GTGAGAACAA TCCTCATCCC 
ACCACCGAGC TTAATTTCAG TTCGCCTTTT GAATTGCTGA TTGCCGTACT GCTTTCCGCT
CAGGCGACCG ATGTCAGTGT TAATAAGGCG ACGGCGAAAC TCTACCCGGT GGCGAATACG
CCTGCAGCGA TGCTTGAACT GGGCGTTGAA GGGGTGAAAA CCTATATCAA AACGATTGGG
CTTTATAACA GCAAAGCAGA AAATATCATC AAAACCTGCC GTATCTTGCT GGAGCAGCAT
AATGGCGAGG TTCCGGAAGA TCGTGCTGCG CTTGAAGCCC TGCCCGGCGT AGGTCGTAAA
ACAGCCAACG TCGTATTAAA CACTGCATTC GGCTGGCCGA CTATTGCTGT CGACACGCAC
ATTTTCCGCG TTTGTAATCG TACTCAATTT GCGCCGGGGA AAAACGTCGA ACAGGTAGAA
GAAAAGCTAC TGAAAGTGGT TCCAGCAGAG TTTAAAGTCG ACTGCCACCA TTGGTTGATC
CTGCACGGGC GTTATACCTG CATTGCCCGC AAGCCCCGCT GTGGCTCTTG TATTATTGAA
GATCTTTGTG AATACAAAGA GAAAGTTGAC ATCTGA
 
Protein sequence
MNKAKRLEIL TRLRENNPHP TTELNFSSPF ELLIAVLLSA QATDVSVNKA TAKLYPVANT 
PAAMLELGVE GVKTYIKTIG LYNSKAENII KTCRILLEQH NGEVPEDRAA LEALPGVGRK
TANVVLNTAF GWPTIAVDTH IFRVCNRTQF APGKNVEQVE EKLLKVVPAE FKVDCHHWLI
LHGRYTCIAR KPRCGSCIIE DLCEYKEKVD I