Gene EcDH1_2003 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_2003 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp2161256 
End bp2162530 
Gene Length1275 bp 
Protein Length424 aa 
Translation table11 
GC content52% 
IMG OID 
Producttyrosyl-tRNA synthetase 
Protein accessionACX39660 
Protein GI260449238 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.00229572 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAAGCA GTAACTTGAT TAAACAATTG CAAGAGCGGG GGCTGGTAGC CCAGGTGACG 
GACGAGGAAG CGTTAGCAGA GCGACTGGCG CAAGGCCCGA TCGCGCTCTA TTGCGGCTTC
GATCCTACCG CTGACAGCTT GCATTTGGGG CATCTTGTTC CATTGTTATG CCTGAAACGC
TTCCAGCAGG CGGGCCACAA GCCGGTTGCG CTGGTAGGCG GCGCGACGGG TCTGATTGGC
GACCCGAGCT TCAAAGCTGC CGAGCGTAAG CTGAACACCG AAGAAACTGT TCAGGAGTGG
GTGGACAAAA TCCGTAAGCA GGTTGCCCCG TTCCTCGATT TCGACTGTGG AGAAAACTCT
GCTATCGCGG CGAACAACTA TGACTGGTTC GGCAATATGA ATGTGCTGAC CTTCCTGCGC
GATATTGGCA AACACTTCTC CGTTAACCAG ATGATCAACA AAGAAGCGGT TAAGCAGCGT
CTCAACCGTG AAGATCAGGG GATTTCGTTC ACTGAGTTTT CCTACAACCT GTTGCAGGGT
TATGACTTCG CCTGTCTGAA CAAACAGTAC GGTGTGGTGC TGCAAATTGG TGGTTCTGAC
CAGTGGGGTA ACATCACTTC TGGTATCGAC CTGACCCGTC GTCTGCATCA GAATCAGGTG
TTTGGCCTGA CCGTTCCGCT GATCACTAAA GCAGATGGCA CCAAATTTGG TAAAACTGAA
GGCGGCGCAG TCTGGTTGGA TCCGAAGAAA ACCAGCCCGT ACAAATTCTA CCAGTTCTGG
ATCAACACTG CGGATGCCGA CGTTTACCGC TTCCTGAAGT TCTTCACCTT TATGAGCATT
GAAGAGATCA ACGCCCTGGA AGAAGAAGAT AAAAACAGCG GTAAAGCACC GCGCGCCCAG
TATGTACTGG CGGAGCAGGT GACTCGTCTG GTTCACGGTG AAGAAGGTTT ACAGGCGGCA
AAACGTATTA CCGAATGCCT GTTCAGCGGT TCTTTGAGTG CGCTGAGTGA AGCGGACTTC
GAACAGCTGG CGCAGGACGG CGTACCGATG GTTGAGATGG AAAAGGGCGC AGACCTGATG
CAGGCACTGG TCGATTCTGA ACTGCAACCT TCCCGTGGTC AGGCACGTAA AACTATCGCC
TCCAATGCCA TCACCATTAA CGGTGAAAAA CAGTCCGATC CTGAATACTT CTTTAAAGAA
GAAGATCGTC TGTTTGGTCG TTTTACCTTA CTGCGTCGCG GTAAAAAGAA TTACTGTCTG
ATTTGCTGGA AATAA
 
Protein sequence
MASSNLIKQL QERGLVAQVT DEEALAERLA QGPIALYCGF DPTADSLHLG HLVPLLCLKR 
FQQAGHKPVA LVGGATGLIG DPSFKAAERK LNTEETVQEW VDKIRKQVAP FLDFDCGENS
AIAANNYDWF GNMNVLTFLR DIGKHFSVNQ MINKEAVKQR LNREDQGISF TEFSYNLLQG
YDFACLNKQY GVVLQIGGSD QWGNITSGID LTRRLHQNQV FGLTVPLITK ADGTKFGKTE
GGAVWLDPKK TSPYKFYQFW INTADADVYR FLKFFTFMSI EEINALEEED KNSGKAPRAQ
YVLAEQVTRL VHGEEGLQAA KRITECLFSG SLSALSEADF EQLAQDGVPM VEMEKGADLM
QALVDSELQP SRGQARKTIA SNAITINGEK QSDPEYFFKE EDRLFGRFTL LRRGKKNYCL
ICWK