Gene EcDH1_2001 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_2001 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp2160089 
End bp2160412 
Gene Length324 bp 
Protein Length107 aa 
Translation table11 
GC content46% 
IMG OID 
Productputative lipoprotein 
Protein accessionACX39658 
Protein GI260449236 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.000221904 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAC TGTTAATTAT CATTTTGCCG GTCCTTCTCT CCGGCTGTAG CGCCTTTAAT 
CAGCTGGTTG AGCGCATGCA AACCGATACG CTGGAATACC AGTGTGATGA AAAACCGTTG
ACGGTCAAAC TGAATAATCC GCGCCAGGAG GTCAGTTTTG TTTACGATAA TCAACTACTG
CATCTCAAAC AGGGCATTTC AGCCTCTGGC GCGCGTTACA CTGACGGAAT CTATGTTTTC
TGGTCGAAAG GCGATGAAGC GACTGTCTAT AAACGCGACC GCATCGTCTT GAATAACTGT
CAGTTACAAA ATCCACAGCG TTGA
 
Protein sequence
MKKLLIIILP VLLSGCSAFN QLVERMQTDT LEYQCDEKPL TVKLNNPRQE VSFVYDNQLL 
HLKQGISASG ARYTDGIYVF WSKGDEATVY KRDRIVLNNC QLQNPQR