Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcDH1_1991 |
Symbol | |
ID | 0 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli DH1 |
Kingdom | Bacteria |
Replicon accession | CP001637 |
Strand | - |
Start bp | 2151856 |
End bp | 2152455 |
Gene Length | 600 bp |
Protein Length | 199 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | |
Product | transcriptional regulator, TetR family |
Protein accession | ACX39648 |
Protein GI | 260449226 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0000000000000115862 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAACAAAC ACACCGAACA TGATACTCGC GAACATCTCC TGGCGACGGG CGAGCAACTT TGCCTGCAAC GTGGATTCAC CGGGATGGGG CTAAGCGAAT TACTAAAAAC CGCTGAAGTG CCGAAAGGGT CCTTCTATCA CTACTTTCGC TCTAAAGAAG CGTTTGGCGT TGCCATGCTT GAGCGTCATT ACGCCGCATA TCACCAGCGA CTGACTGAGT TGCTGCAATC CGGCGAAGGT AACTACCGCG ACCGCATACT GGCTTATTAC CAGCAAACAC TGAACCAGTT TTGCCAACAT GGAACCATCA GTGGTTGCCT GACAGTAAAA CTCTCTGCCG AAGTGTGCGA TCTGTCAGAA GATATGCGCA GCGCGATGGA TAAAGGTGCT CGCGGCGTGA TCGCCCTGCT CTCTCAGGCG CTGGAAAATG GCCGTGAGAA CCATTGTTTA ACCTTTTGTG GCGAACCGCT GCAACAGGCA CAAGTGCTTT ACGCACTGTG GCTTGGCGCG AATCTGCAGG CCAAAATTTC GCGCAGTTTC GAGCCACTGG AAAACGCGCT GGCCCATGTA AAAAACATTA TTGCGACGCC TGCCGTTTAG
|
Protein sequence | MNKHTEHDTR EHLLATGEQL CLQRGFTGMG LSELLKTAEV PKGSFYHYFR SKEAFGVAML ERHYAAYHQR LTELLQSGEG NYRDRILAYY QQTLNQFCQH GTISGCLTVK LSAEVCDLSE DMRSAMDKGA RGVIALLSQA LENGRENHCL TFCGEPLQQA QVLYALWLGA NLQAKISRSF EPLENALAHV KNIIATPAV
|
| |