Gene EcDH1_1988 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_1988 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp2149484 
End bp2150131 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content54% 
IMG OID 
Productribonuclease T 
Protein accessionACX39645 
Protein GI260449223 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.000048723 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCGATA ACGCTCAACT TACCGGTCTG TGCGACCGTT TTCGTGGTTT TTATCCTGTT 
GTGATCGATG TTGAAACAGC CGGATTTAAC GCCAAAACCG ATGCGCTGCT TGAGATTGCC
GCCATCACCC TGAAAATGGA TGAACAAGGC TGGCTGATGC CGGACACCAC ATTACATTTC
CACGTCGAAC CATTTGTCGG CGCAAATTTG CAACCAGAAG CCCTCGCCTT CAACGGCATT
GACCCGAACG ATCCCGATCG CGGCGCGGTC AGCGAATACG AGGCGCTGCA CGAAATTTTT
AAAGTTGTAC GTAAAGGTAT TAAAGCGAGC GGCTGTAACC GCGCCATTAT GGTGGCGCAC
AATGCCAATT TTGATCACAG CTTTATGATG GCCGCCGCAG AACGCGCCTC ACTGAAACGT
AACCCGTTCC ACCCTTTCGC CACTTTTGAC ACTGCTGCAC TGGCCGGGCT GGCACTCGGA
CAAACCGTAT TGTCAAAGGC TTGCCAGACC GCTGGCATGG ACTTCGACAG CACCCAGGCG
CACTCCGCGC TGTACGACAC CGAACGCACT GCTGTGCTGT TTTGTGAAAT CGTCAACCGC
TGGAAACGTC TGGGAGGCTG GCCGCTATCT GCCGCCGAAG AGGTGTAA
 
Protein sequence
MSDNAQLTGL CDRFRGFYPV VIDVETAGFN AKTDALLEIA AITLKMDEQG WLMPDTTLHF 
HVEPFVGANL QPEALAFNGI DPNDPDRGAV SEYEALHEIF KVVRKGIKAS GCNRAIMVAH
NANFDHSFMM AAAERASLKR NPFHPFATFD TAALAGLALG QTVLSKACQT AGMDFDSTQA
HSALYDTERT AVLFCEIVNR WKRLGGWPLS AAEEV