Gene EcDH1_1982 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_1982 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp2139609 
End bp2140634 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content54% 
IMG OID 
Producttranscriptional regulator, LacI family 
Protein accessionACX39639 
Protein GI260449217 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.0168569 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAACAA TAAAAGATGT AGCGAAACGA GCAAACGTTT CCACTACAAC TGTGTCACAC 
GTGATCAACA AAACACGTTT CGTCGCTGAA GAAACGCGCA ACGCCGTGTG GGCAGCGATT
AAAGAATTAC ACTACTCCCC TAGCGCGGTG GCGCGTAGCC TGAAGGTTAA CCACACCAAG
TCTATCGGTT TGCTGGCGAC CAGCAGCGAA GCGGCCTATT TTGCCGAGAT CATTGAAGCA
GTTGAAAAAA ATTGCTTCCA GAAAGGTTAC ACCCTGATTC TGGGCAATGC GTGGAACAAT
CTTGAGAAAC AGCGGGCTTA TCTGTCGATG ATGGCGCAAA AACGCGTCGA TGGTCTGCTG
GTGATGTGTT CTGAGTACCC AGAGCCGTTG CTGGCGATGC TGGAAGAGTA TCGCCATATC
CCAATGGTGG TCATGGACTG GGGTGAAGCA AAAGCTGACT TCACCGATGC GGTCATTGAT
AACGCGTTCG AAGGCGGCTA CATGGCCGGG CGTTATCTGA TTGAACGCGG TCACCGCGAA
ATCGGCGTCA TCCCCGGCCC GCTGGAACGT AACACCGGCG CAGGCCGCCT TGCCGGTTTT
ATGAAGGCGA TGGAAGAAGC GATGATCAAG GTGCCGGAAA GCTGGATTGT GCAGGGTGAC
TTTGAACCTG AATCCGGTTA TCGCGCCATG CAGCAAATCC TGTCGCAGCC GCATCGCCCT
ACTGCCGTCT TCTGTGGTGG CGATATCATG GCAATGGGCG CACTTTGTGC TGCTGATGAA
ATGGGCCTGC GCGTCCCGCA GGATGTTTCG CTGATCGGTT ATGATAACGT GCGCAACGCG
CGCTATTTTA CGCCGGCGCT GACCACGATC CATCAGCCAA AAGATTCGCT GGGTGAAACA
GCGTTCAACA TGCTGTTGGA TCGTATCGTC AACAAACGTG AAGAACCGCA GTCTATTGAA
GTGCATCCGC GCTTGATTGA ACGCCGCTCC GTGGCTGACG GCCCGTTCCG CGACTATCGT
CGTTAA
 
Protein sequence
MATIKDVAKR ANVSTTTVSH VINKTRFVAE ETRNAVWAAI KELHYSPSAV ARSLKVNHTK 
SIGLLATSSE AAYFAEIIEA VEKNCFQKGY TLILGNAWNN LEKQRAYLSM MAQKRVDGLL
VMCSEYPEPL LAMLEEYRHI PMVVMDWGEA KADFTDAVID NAFEGGYMAG RYLIERGHRE
IGVIPGPLER NTGAGRLAGF MKAMEEAMIK VPESWIVQGD FEPESGYRAM QQILSQPHRP
TAVFCGGDIM AMGALCAADE MGLRVPQDVS LIGYDNVRNA RYFTPALTTI HQPKDSLGET
AFNMLLDRIV NKREEPQSIE VHPRLIERRS VADGPFRDYR R