| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcDH1_1980 |
|---|
| Symbol | |
|---|
| ID | 0 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli DH1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | CP001637 |
|---|
| Strand | - |
|---|
| Start bp | 2137356 |
|---|
| End bp | 2138567 |
|---|
| Gene Length | 1212 bp |
|---|
| Protein Length | 403 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | |
|---|
| Product | drug resistance transporter, Bcr/CflA subfamily |
|---|
| Protein accession | ACX39637 |
|---|
| Protein GI | 260449215 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.00451664 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAACCTG GGAAAAGATT TTTAGTCTGG CTGGCGGGTT TGAGCGTACT CGGTTTTCTG
GCAACCGATA TGTATCTGCC TGCTTTCGCC GCCATACAGG CCGACCTGCA AACGCCTGCG
TCTGCTGTCA GTGCCAGCCT TAGTCTGTTC CTTGCCGGTT TTGCCGCAGC CCAGCTTCTG
TGGGGGCCGC TCTCCGACCG TTATGGTCGT AAACCGGTAT TATTAATCGG CCTGACAATT
TTTGCGTTAG GTAGTCTGGG GATGCTGTGG GTAGAAAACG CCGCTACGCT GCTGGTATTG
CGTTTTGTAC AGGCTGTGGG TGTCTGCGCC GCGGCGGTTA TCTGGCAAGC ATTAGTGACA
GATTATTATC CTTCACAGAA AGTTAACCGT ATTTTTGCGG CCATCATGCC GCTGGTGGGT
CTATCTCCGG CACTGGCTCC TCTGTTAGGA AGCTGGCTGC TGGTCCATTT TTCCTGGCAG
GCGATTTTCG CCACCCTGTT TGCCATTACC GTGGTGCTGA TTCTGCCTAT TTTCTGGCTC
AAACCCACGA CGAAGGCCCG TAACAATAGT CAGGATGGTC TGACCTTTAC CGACCTGCTA
CGTTCTAAAA CCTATCGCGG CAACGTGCTG ATATACGCAG CCTGTTCAGC CAGTTTTTTT
GCATGGCTGA CCGGTTCACC GTTCATCCTT AGTGAAATGG GCTACAGCCC GGCAGTTATT
GGTTTAAGTT ATGTCCCGCA AACTATCGCG TTTCTGATTG GTGGTTATGG CTGTCGCGCC
GCGCTGCAGA AATGGCAAGG CAAGCAGTTA TTACCGTGGT TGCTGGTGCT GTTTGCTGTC
AGCGTCATTG CGACCTGGGC TGCGGGCTTC ATTAGCCATG TGTCGCTGGT CGAAATCCTG
ATCCCATTCT GTGTGATGGC GATTGCCAAT GGCGCGATCT ACCCTATTGT TGTCGCCCAG
GCGCTGCGTC CCTTCCCACA CGCAACTGGT CGCGCCGCAG CGTTGCAGAA CACTCTTCAA
CTGGGTCTGT GCTTCCTCGC AAGTCTGGTA GTTTCCTGGC TGATCAGTAT CAGCACGCCA
TTGCTCACCA CCACCAGCGT GATGTTATCA ACAGTAGTGC TGGTCGCGCT GGGTTACATG
ATGCAACGTT GTGAAGAAGT TGGCTGCCAG AATCATGGCA ATGCCGAAGT CGCTCATAGC
GAATCACACT GA
|
|---|
| Protein sequence | MQPGKRFLVW LAGLSVLGFL ATDMYLPAFA AIQADLQTPA SAVSASLSLF LAGFAAAQLL
WGPLSDRYGR KPVLLIGLTI FALGSLGMLW VENAATLLVL RFVQAVGVCA AAVIWQALVT
DYYPSQKVNR IFAAIMPLVG LSPALAPLLG SWLLVHFSWQ AIFATLFAIT VVLILPIFWL
KPTTKARNNS QDGLTFTDLL RSKTYRGNVL IYAACSASFF AWLTGSPFIL SEMGYSPAVI
GLSYVPQTIA FLIGGYGCRA ALQKWQGKQL LPWLLVLFAV SVIATWAAGF ISHVSLVEIL
IPFCVMAIAN GAIYPIVVAQ ALRPFPHATG RAAALQNTLQ LGLCFLASLV VSWLISISTP
LLTTTSVMLS TVVLVALGYM MQRCEEVGCQ NHGNAEVAHS ESH
|
|---|
| |