| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcDH1_1974 |
|---|
| Symbol | |
|---|
| ID | 0 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli DH1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | CP001637 |
|---|
| Strand | - |
|---|
| Start bp | 2129743 |
|---|
| End bp | 2131347 |
|---|
| Gene Length | 1605 bp |
|---|
| Protein Length | 534 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | |
|---|
| Product | conserved hypothetical protein |
|---|
| Protein accession | ACX39631 |
|---|
| Protein GI | 260449209 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.000437192 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAA TTGCTATTGT GGGTGCCGGG CCTACGGGGA TCTACACCTT ATTCTCGCTT
CTACAGCAAC AAACTCCACT TTCTATTTCT ATCTTCGAGC AGGCTGACGA GGCCGGTGTC
GGGATGCCAT ACAGTGATGA GGAAAACTCA AAAATGATGC TGGCAAATAT TGCCAGTATT
GAAATACCGC CGATTTATTG TACGTATCTC GAATGGCTAC AAAAGCAAGA AGACAGCCAT
CTCCAGCGTT ATGGCGTTAA AAAAGAAACC TTGCACGATC GTCAGTTTTT ACCGCGAATT
CTGCTGGGCG AATATTTCCG CGATCAATTT TTACGACTAG TAGACCAGGC ACGACAGCAA
AAATTTGCAG TGGCTGTTTA TGAATCATGC CAGGTTACCG ATCTGCAAAT TACAAATGCT
GGCGTCATGC TCGCTACAAA TCAGGATTTA CCCAGCGAGA CGTTTGATTT AGCGGTGATC
GCCACGGGTC ACGTCTGGCC TGATGAAGAA GAAGCAACCC GAACGTATTT TCCCAGCCCG
TGGTCAGGCC TGATGGAAGC AAAGGTCGAT GCGTGTAACG TGGGTATTAT GGGAACATCC
TTGAGCGGAC TGGATGCGGC AATGGCAGTG GCTATTCAGC ATGGTTCGTT CATTGAAGAT
GATAAACAAC ACGTCGTTTT TCACCGCGAT AACGCAAGTG AAAAGCTAAA TATCACGTTG
TTGTCGCGCA CGGGTATTTT ACCCGAAGCC GATTTCTATT GCCCTATTCC CTACGAGCCC
TTACACATCG TCACCGATCA GGCATTAAAT GCTGAGATTC AAAAAGGCGA AGAGGGCCTT
TTGGATCGGG TATTTAGATT GATAGTAGAG GAAATCAAGT TTGCTGATCC AGACTGGAGT
CAACGCATAG CCTTAGAGAG CCTGAATGTC GATTCCTTTG CTCAAGCCTG GTTTGCCGAG
CGCAAACAAC GCGACCCATT TGACTGGGCA GAAAAAAATC TCCAGGAAGT CGAACGCAAT
AAACGAGAAA AACATACTGT TCCCTGGCGT TATGTCATTC TGCGCCTGCA TGAAGCCGTA
CAGGAAATTG TTCCACATCT GAATGAACAC GACCATAAAC GGTTCAGTAA AGGCCTTGCC
CGGGTTTTCA TCGATAATTA TGCGGCAATC CCTTCAGAGT CTATTCGTCG CCTACTTGCC
TTACGTGAAG CGGGAATCAT TCATATTCTC GCCCTCGGTG AAGACTACAA AATGGAAATT
AATGAGTCGC GCACCGTCCT GAAAACGGAA GACAACAGCT ACTCGTTTGA CGTTTTTATT
GATGCCCGCG GACAACGTCC GCTTAAAGTG AAAGATATCC CTTTCCCTGG GCTACGCGAG
CAATTACAGA AAACAGGGGA TGAAATCCCT GATGTTGGCG AAGATTATAC GTTACAGCAA
CCCGAAGATA TTCGTGGGCG CGTAGCGTTC GGCGCGTTGC CCTGGTTGAT GCACGACCAG
CCTTTCGTTC AGGGACTTAC GGCATGTGCA GAAATTGGTG AGGCGATGGC TCGGGCGGTC
GTAAAGCCTG CATCCCGTGC TCGTCGGCGT CTTTCGTTTG ATTAA
|
|---|
| Protein sequence | MKKIAIVGAG PTGIYTLFSL LQQQTPLSIS IFEQADEAGV GMPYSDEENS KMMLANIASI
EIPPIYCTYL EWLQKQEDSH LQRYGVKKET LHDRQFLPRI LLGEYFRDQF LRLVDQARQQ
KFAVAVYESC QVTDLQITNA GVMLATNQDL PSETFDLAVI ATGHVWPDEE EATRTYFPSP
WSGLMEAKVD ACNVGIMGTS LSGLDAAMAV AIQHGSFIED DKQHVVFHRD NASEKLNITL
LSRTGILPEA DFYCPIPYEP LHIVTDQALN AEIQKGEEGL LDRVFRLIVE EIKFADPDWS
QRIALESLNV DSFAQAWFAE RKQRDPFDWA EKNLQEVERN KREKHTVPWR YVILRLHEAV
QEIVPHLNEH DHKRFSKGLA RVFIDNYAAI PSESIRRLLA LREAGIIHIL ALGEDYKMEI
NESRTVLKTE DNSYSFDVFI DARGQRPLKV KDIPFPGLRE QLQKTGDEIP DVGEDYTLQQ
PEDIRGRVAF GALPWLMHDQ PFVQGLTACA EIGEAMARAV VKPASRARRR LSFD
|
|---|
| |