Gene EcDH1_1972 details

Gene Information

• Locus tag: EcDH1_1972
• ID: 0
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Escherichia coli DH1
• Kingdom: Bacteria
• Replicon accession: CP001637
• Strand: +
• Start bp: 2128130
• End bp: 2128915
• Gene Length: 786 bp
• Protein Length: 261 aa
• Translation table: 11
• GC content: 49%
• Product: cytochrome B561
• Protein accession: ACX39629
• Protein GI: 260449207

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 0.00612033
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAACCCGT CGCAACATGC TGAACAGTTT CAGAGCCAGT TAGCGAACTA TGTGCCACAG 
TTCACTCCCG AATTTTGGCC GGTGTGGTTG ATCATTGCCG GAGTATTGCT GGTTGGGATG 
TGGTTGGTGC TGGGGCTGCA TGCCTTGCTT CGTGCTCGTG GCGTGAAGAA ATCAGCCACC 
GATCATGGTG AGAAGATTTA TCTTTACAGC AAAGCGGTCA GATTATGGCA CTGGTCGAAT 
GCGTTACTCT TTGTATTGTT GCTGGCCAGT GGGCTGATAA ATCACTTTGC GATGGTGGGC 
GCAACTGCGG TTAAAAGTCT GGTTGCGGTG CATGAAGTTT GCGGATTTTT GTTACTGGCA 
TGCTGGCTCG GCTTTGTGCT GATCAATGCC GTTGGGGATA ATGGTCACCA CTATCGCATT 
CGTCGTCAGG GGTGGCTGGA ACGAGCGGCA AAACAAACGC GATTTTATTT GTTTGGCATT 
ATGCAGGGGG AAGAACATCC TTTCCCGGCA ACAACCCAGT CTAAATTTAA TCCCTTACAG 
CAGGTCGCCT ATGTTGGTGT CATGTATGGA TTGCTGCCGT TGTTACTATT GACGGGGCTG 
CTGTGTCTCT ATCCGCAAGC CGTGGGAGAT GTGTTTCCTG GCGTAAGATA CTGGTTATTG 
CAGACACATT TTGCTCTGGC ATTTATAAGC CTCTTTTTTA TCTTCGGTCA TCTTTATCTT 
TGCACCACGG GGCGTACGCC ACACGAAACC TTTAAAAGCA TGGTCGATGG CTATCACCGG 
CACTAA 

 

Protein sequence

MNPSQHAEQF QSQLANYVPQ FTPEFWPVWL IIAGVLLVGM WLVLGLHALL RARGVKKSAT 
DHGEKIYLYS KAVRLWHWSN ALLFVLLLAS GLINHFAMVG ATAVKSLVAV HEVCGFLLLA 
CWLGFVLINA VGDNGHHYRI RRQGWLERAA KQTRFYLFGI MQGEEHPFPA TTQSKFNPLQ 
QVAYVGVMYG LLPLLLLTGL LCLYPQAVGD VFPGVRYWLL QTHFALAFIS LFFIFGHLYL 
CTTGRTPHET FKSMVDGYHR H