Gene EcDH1_1938 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_1938 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp2088997 
End bp2090043 
Gene Length1047 bp 
Protein Length348 aa 
Translation table11 
GC content53% 
IMG OID 
Productphospho-2-dehydro-3-deoxyheptonate aldolase 
Protein accessionACX39595 
Protein GI260449173 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACAGAA CTGACGAACT CCGTACTGCG CGTATTGAGA GCCTGGTAAC GCCCGCCGAA 
CTCGCGCTAC GGTATCCCGT AACGCCTGGC GTCGCCACCC ATGTCACCGA CTCCCGCCGC
AGAATTGAAA AAATACTGAA TGGTGAAGAT AAGCGACTGT TGGTCATTAT TGGCCCCTGC
TCGATCCACG ATCTCACCGC TGCAATGGAG TACGCCACCC GTCTGCAGTC GCTGCGCAAC
CAGTACCAGT CACGGCTGGA AATCGTAATG CGCACCTATT TTGAAAAACC ACGAACTGTT
GTCGGCTGGA AAGGACTAAT CTCCGATCCA GATTTAAACG GCAGCTATCG GGTAAATCAC
GGTCTGGAGC TGGCGCGCAA ATTACTTTTA CAGGTAAATG AGCTGGGCGT CCCAACCGCG
ACCGAGTTCC TCGATATGGT GACCGGTCAG TTTATTGCTG ATTTAATCAG TTGGGGCGCG
ATTGGCGCAC GTACTACCGA AAGTCAGATC CACCGCGAAA TGGCTTCGGC ACTCTCCTGT
CCGGTAGGTT TTAAAAATGG TACCGATGGC AATACGCGGA TTGCTGTGGA TGCTATCCGC
GCAGCCCGCG CCAGCCATAT GTTCCTCTCG CCAGACAAAA ATGGTCAGAT GACCATCTAT
CAGACCAGCG GCAACCCGTA TGGCCACATT ATTATGCGTG GCGGCAAAAA ACCGAATTAT
CATGCCGATG ATATCGCCGC AGCCTGCGAT ACGCTGCACG AGTTTGATTT ACCTGAACAT
CTGGTGGTGG ATTTCAGCCA CGGTAACTGC CAGAAGCAGC ACCGTCGCCA GTTAGAAGTT
TGTGAGGATA TTTGTCAGCA AATCCGCAAT GGCTCTACGG CGATTGCTGG AATTATGGCG
GAAAGTTTCC TGCGCGAAGG AACGCAAAAA ATCGTCGGCA GTCAGCCGCT CACTTACGGT
CAATCCATTA CCGACCCGTG TCTGGGCTGG GAGGATACCG AACGCCTGGT CGAAAAACTC
GCCTCTGCGG TAGATACCCG CTTCTGA
 
Protein sequence
MNRTDELRTA RIESLVTPAE LALRYPVTPG VATHVTDSRR RIEKILNGED KRLLVIIGPC 
SIHDLTAAME YATRLQSLRN QYQSRLEIVM RTYFEKPRTV VGWKGLISDP DLNGSYRVNH
GLELARKLLL QVNELGVPTA TEFLDMVTGQ FIADLISWGA IGARTTESQI HREMASALSC
PVGFKNGTDG NTRIAVDAIR AARASHMFLS PDKNGQMTIY QTSGNPYGHI IMRGGKKPNY
HADDIAAACD TLHEFDLPEH LVVDFSHGNC QKQHRRQLEV CEDICQQIRN GSTAIAGIMA
ESFLREGTQK IVGSQPLTYG QSITDPCLGW EDTERLVEKL ASAVDTRF