Gene EcDH1_1873 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_1873 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp2024499 
End bp2025857 
Gene Length1359 bp 
Protein Length452 aa 
Translation table11 
GC content45% 
IMG OID 
Productmajor facilitator superfamily MFS_1 
Protein accessionACX39531 
Protein GI260449109 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0070319 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAACAAT ATGATCAAAT TGGCGCAAGA CTGGACCGCT TGCCTTTGGC CCGGTTTCAT 
TATCGTATAT TTGGTATTAT AAGCTTTAGT CTGTTATTAA CAGGGTTTTT GAGTTACTCC
GGTAATGTCG TCTTAGCAAA GCTGGTAAGC AATGGATGGT CAAATAATTT CCTCAATGCC
GCCTTTACCT CGGCATTAAT GTTTGGTTAT TTCATCGGCT CACTTACTGG TGGGTTTATT
GGTGACTACT TTGGGCGGCG CAGGGCGTTT CGCATAAATC TTCTCATCGT CGGTATTGCT
GCAACAGGGG CCGCTTTTGT CCCTGATATG TACTGGCTCA TCTTCTTTCG CTTCCTGATG
GGAACAGGAA TGGGGGCGCT GATTATGGTT GGCTATGCCT CATTTACGGA GTTTATCCCC
GCGACGGTGC GTGGAAAATG GTCCGCGCGG CTCTCATTTG TTGGTAACTG GTCGCCCATG
CTGTCTGCGG CGATAGGCGT GGTGGTTATC GCTTTTTTTA GTTGGCGAAT AATGTTTCTG
CTGGGTGGTA TTGGCATACT GTTAGCCTGG TTTCTCTCAG GTAAATACTT TATCGAGTCG
CCACGATGGC TGGCAGGGAA AGGGCAAATC GCAGGTGCAG AATGCCAACT TCGTGAAGTA
GAGCAGCAAA TTGAAAGAGA GAAGAGTATT CGTTTACCCC CGCTTACTTC GTATCAGAGC
AACAGCAAGG TTAAAGTAAT CAAGGGTACT TTCTGGCTCC TGTTTAAAGG TGAAATGTTA
CGACGTACAT TAGTCGCGAT TACTGTTTTA ATTGCAATGA ACATTTCGCT TTATACCATC
ACCGTATGGA TACCGACCAT ATTTGTTAAC TCCGGCATTG ATGTCGATAA ATCAATATTA
ATGACCGCTG TTATTATGAT TGGCGCTCCG GTAGGAATAT TTATTGCGGC ATTAATTATT
GATCATTTTC CTCGTCGGTT ATTTGGCTCC ACCTTACTTA TTATTATTGC CGTGTTAGGC
TATATCTATT CAATTCAGAC TACAGAGTGG GCGATTTTAA TCTATGGACT GGTGATGATC
TTCTTTTTAT ACATGTATGT TTGCTTCGCG TCGGCGGTTT ATATCCCGGA GCTTTGGCCA
ACGCATTTAC GCCTGCGCGG TTCGGGTTTC GTTAATGCCG TCGGACGGAT CGTCGCAGTC
TTCACGCCCT ATGGCGTTGC GGCATTATTA ACACATTATG GGTCGATCAC GGTGTTTATG
GTACTTGGTG TTATGTTATT GCTCTGTGCG CTGGTTCTCT CCATTTTTGG CATCGAAACG
CGGAAGGTGT CGTTGGAAGA GATTTCTGAG GTGAATTAA
 
Protein sequence
MEQYDQIGAR LDRLPLARFH YRIFGIISFS LLLTGFLSYS GNVVLAKLVS NGWSNNFLNA 
AFTSALMFGY FIGSLTGGFI GDYFGRRRAF RINLLIVGIA ATGAAFVPDM YWLIFFRFLM
GTGMGALIMV GYASFTEFIP ATVRGKWSAR LSFVGNWSPM LSAAIGVVVI AFFSWRIMFL
LGGIGILLAW FLSGKYFIES PRWLAGKGQI AGAECQLREV EQQIEREKSI RLPPLTSYQS
NSKVKVIKGT FWLLFKGEML RRTLVAITVL IAMNISLYTI TVWIPTIFVN SGIDVDKSIL
MTAVIMIGAP VGIFIAALII DHFPRRLFGS TLLIIIAVLG YIYSIQTTEW AILIYGLVMI
FFLYMYVCFA SAVYIPELWP THLRLRGSGF VNAVGRIVAV FTPYGVAALL THYGSITVFM
VLGVMLLLCA LVLSIFGIET RKVSLEEISE VN