| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcDH1_1856 |
|---|
| Symbol | |
|---|
| ID | 0 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli DH1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | CP001637 |
|---|
| Strand | - |
|---|
| Start bp | 2004947 |
|---|
| End bp | 2006437 |
|---|
| Gene Length | 1491 bp |
|---|
| Protein Length | 496 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | |
|---|
| Product | diguanylate cyclase |
|---|
| Protein accession | ACX39514 |
|---|
| Protein GI | 260449092 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 0.26898 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAATTGC ACCATAGAAT GCTCCGGCAT TTTATCGCCG CAAGTGTCAT TGTGCTGACA
TCTTCCTTCC TTATTTTTGA ACTTGTCGCC AGCGACAGAG CAATGAGTGC CTATCTGCGC
TATATCGTGC AGAAAGCAGA CTCCTCCTTT CTTTATGATA AGTATCAGAA TCAGAGTATT
GCCGCGCATG TGATGCGCGC TCTCGCTGCT GAGCAGTCGG AAGTGTCGCC AGAACAGCGG
CGCGCCATCT GCGAGGCTTT TGAGTCTGCC AATAACACCC ATGGCTTAAA CCTGACTGCC
CATAAATACC CGGGCTTACG CGGCACACTA CAAACCGCAT CCACTGACTG CGACACAATT
GTGGAAGCTG CAGCACTATT ACCCGCTTTT GATCAGGCAG TGGAAGGCAA CCGCCACCAG
GATGATTACG GTTCAGGTCT TGGGATGGCC GAAGAGAAAT TTCACTATTA TCTCGATCTC
AATGACCGCT ATGTCTATTT TTATGAGCCG GTTAATGTTG AATACTTTGC GATGAATAAC
TGGTCCTTCC TGCAGTCAGG AAGTATTGGC ATCGATCGCA AAGATATTGA AAAGGTATTT
ACCGGGCGTA CCGTATTGTC GAGCATTTAC CAGGATCAGC GTACTAAACA GAACGTGATG
AGTTTGCTGA CGCCGGTATA TGTCGCAGGG CAGCTAAAAG GGATTGTGCT GCTGGATATT
AACAAAAACA ATCTGCGGAA TATCTTTTAT ACTCATGACC GCCCTCTCCT CTGGCGTTTT
CTCAATGTCA CGCTAACCGA TACCGATTCG GGGCGCGACA TTATCATCAA CCAGAGCGAA
GATAATCTGT TCCAGTATGT CAGTTACGTC CATGACTTAC CGGGCGGCAT TCGTGTCTCG
TTATCCATTG ATATTCTTTA CTTTATCACG TCTTCGTGGA AAAGCGTTCT GTTCTGGATT
TTGACGGCGT TAATTTTGCT GAATATGGTG CGGATGCACT TCCGTTTATA CCAAAATGTG
TCGCGAGAAA ATATTAGTGA TGCGATGACT GGACTGTATA ATCGCAAAAT TTTAACCCCT
GAACTGGAGC AGCGGTTGCA GAAACTGGTG CAATCCGGTT CTTCGGTGAT GTTTATTGCT
ATTGACATGG ACAAGTTAAA GCAAATAAAT GACACCCTCG GTCATCAGGA GGGGGATTTA
GCGATTACGT TATTAGCTCA GGCGATTAAA CAGTCGATTC GTAAAAGTGA TTATGCCATC
CGACTCGGTG GCGATGAATT CTGCATCATT CTTGTCGATT CGACGCCGCA AATTGCAGCA
CAACTGCCTG AACGTATCGA AAAACGTCTG CAACATATCG CGCCGCAGAA AGAGATCGGC
TTCTCTTCCG GTATTTACGC GATGAAAGAA AACGATACGT TACATGATGC GTATAAAGCT
TCCGATGAGC GTTTATATGT CAATAAGCAG AACAAAAACA GCCGTTCATG A
|
|---|
| Protein sequence | MKLHHRMLRH FIAASVIVLT SSFLIFELVA SDRAMSAYLR YIVQKADSSF LYDKYQNQSI
AAHVMRALAA EQSEVSPEQR RAICEAFESA NNTHGLNLTA HKYPGLRGTL QTASTDCDTI
VEAAALLPAF DQAVEGNRHQ DDYGSGLGMA EEKFHYYLDL NDRYVYFYEP VNVEYFAMNN
WSFLQSGSIG IDRKDIEKVF TGRTVLSSIY QDQRTKQNVM SLLTPVYVAG QLKGIVLLDI
NKNNLRNIFY THDRPLLWRF LNVTLTDTDS GRDIIINQSE DNLFQYVSYV HDLPGGIRVS
LSIDILYFIT SSWKSVLFWI LTALILLNMV RMHFRLYQNV SRENISDAMT GLYNRKILTP
ELEQRLQKLV QSGSSVMFIA IDMDKLKQIN DTLGHQEGDL AITLLAQAIK QSIRKSDYAI
RLGGDEFCII LVDSTPQIAA QLPERIEKRL QHIAPQKEIG FSSGIYAMKE NDTLHDAYKA
SDERLYVNKQ NKNSRS
|
|---|
| |