| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcDH1_1855 |
|---|
| Symbol | |
|---|
| ID | 0 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli DH1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | CP001637 |
|---|
| Strand | - |
|---|
| Start bp | 2004401 |
|---|
| End bp | 2004904 |
|---|
| Gene Length | 504 bp |
|---|
| Protein Length | 167 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | |
|---|
| Product | YbaK/prolyl-tRNA synthetase associated region |
|---|
| Protein accession | ACX39513 |
|---|
| Protein GI | 260449091 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 0.157643 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTGAAA TGGCTAAAGG AAGCGTGACG CATCAGCGGT TAATCGCTTT ATTATCACAA
GAAGGTGCTG ACTTCCGCGT CGTTACCCAT GAAGCGGTAG GTAAATGTGA AGCGGTGTCA
GAAATTCGTG GCACCGCTCT AGGCCAGGGT GCTAAGGCAC TGGTATGTAA AGTCAAAGGC
AATGGCGTAA ATCAACATGT TCTGGCGATC CTCGCAGCCG ATCAACAGGC CGATCTGAGC
CAACTCGCCA GCCATATAGG CGGATTACGC GCTTCGTTGG CCAGCCCGGC GGAAGTCGAT
GAACTCACAG GCTGTGTCTT CGGCGCGATC CCCCCTTTCA GCTTCCATCC AAAACTCAAA
CTGGTTGCCG ACCCTCTACT CTTCGAACGA TTTGATGAAA TCGCCTTCAA TGCAGGCATG
CTGGATAAAT CCGTTATTTT GAAAACCGCG GATTATTTGC GCATTGCGCA ACCAGAACTG
GTCAATTTCC GCCGCACTGC GTAA
|
|---|
| Protein sequence | MTEMAKGSVT HQRLIALLSQ EGADFRVVTH EAVGKCEAVS EIRGTALGQG AKALVCKVKG
NGVNQHVLAI LAADQQADLS QLASHIGGLR ASLASPAEVD ELTGCVFGAI PPFSFHPKLK
LVADPLLFER FDEIAFNAGM LDKSVILKTA DYLRIAQPEL VNFRRTA
|
|---|
| |