Gene EcDH1_1826 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_1826 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp1975459 
End bp1976430 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content50% 
IMG OID 
ProductPTS system, mannose/fructose/sorbose family, IIA subunit 
Protein accessionACX39484 
Protein GI260449062 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.000156617 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACCATTG CTATTGTTAT AGGCACACAT GGTTGGGCTG CAGAGCAGTT GCTTAAAACG 
GCAGAAATGC TGTTAGGCGA GCAGGAAAAC GTCGGCTGGA TCGATTTCGT TCCAGGTGAA
AATGCCGAAA CGCTGATTGA AAAGTACAAC GCTCAGTTGG CAAAACTCGA CACCACTAAA
GGCGTGCTGT TTCTCGTTGA TACATGGGGA GGCAGCCCGT TCAATGCTGC CAGCCGCATT
GTCGTCGACA AAGAGCATTA TGAAGTCATT GCAGGCGTTA ACATTCCAAT GCTCGTGGAA
ACGTTAATGG CCCGTGATGA TGACCCAAGC TTTGATGAAC TGGTGGCACT GGCAGTAGAA
ACAGGCCGTG AAGGCGTGAA AGCACTGAAA GCCAAACCGG TTGAAAAAGC CGCGCCAGCA
CCCGCTGCCG CAGCACCAAA AGCGGCTCCA ACTCCGGCAA AACCAATGGG GCCAAACGAC
TACATGGTTA TTGGCCTTGC GCGTATCGAC GACCGTCTGA TTCACGGTCA GGTCGCCACC
CGCTGGACCA AAGAAACCAA TGTCTCCCGT ATTATTGTTG TTAGTGATGA AGTGGCTGCG
GATACCGTTC GTAAGACACT GCTCACCCAG GTTGCACCTC CGGGCGTAAC AGCACACGTA
GTTGATGTTG CCAAAATGAT TCGCGTCTAC AACAACCCGA AATATGCTGG CGAACGCGTA
ATGCTGTTAT TTACCAACCC AACAGATGTA GAGCGTCTCG TTGAAGGCGG CGTGAAAATC
ACCTCTGTTA ACGTCGGTGG TATGGCATTC CGTCAGGGTA AAACCCAGGT GAATAACGCG
GTTTCGGTTG ATGAAAAAGA TATCGAGGCG TTCAAGAAAC TGAATGCGCG CGGTATTGAG
CTGGAAGTCC GTAAGGTTTC CACCGATCCG AAACTGAAAA TGATGGATCT GATCAGCAAA
ATCGATAAGT AA
 
Protein sequence
MTIAIVIGTH GWAAEQLLKT AEMLLGEQEN VGWIDFVPGE NAETLIEKYN AQLAKLDTTK 
GVLFLVDTWG GSPFNAASRI VVDKEHYEVI AGVNIPMLVE TLMARDDDPS FDELVALAVE
TGREGVKALK AKPVEKAAPA PAAAAPKAAP TPAKPMGPND YMVIGLARID DRLIHGQVAT
RWTKETNVSR IIVVSDEVAA DTVRKTLLTQ VAPPGVTAHV VDVAKMIRVY NNPKYAGERV
MLLFTNPTDV ERLVEGGVKI TSVNVGGMAF RQGKTQVNNA VSVDEKDIEA FKKLNARGIE
LEVRKVSTDP KLKMMDLISK IDK