| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcDH1_1809 |
|---|
| Symbol | |
|---|
| ID | 0 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli DH1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | CP001637 |
|---|
| Strand | - |
|---|
| Start bp | 1959738 |
|---|
| End bp | 1961021 |
|---|
| Gene Length | 1284 bp |
|---|
| Protein Length | 427 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | |
|---|
| Product | integral membrane protein, PqiA family |
|---|
| Protein accession | ACX39468 |
|---|
| Protein GI | 260449046 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.0679046 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTCTTA ACACACCACA AATTACGCCG ACAAAAAAGA TAACAGTGAG GGCAATCGGC
GAGGAACTGC CGCGTGGTGA TTACCAACGT TGCCCGCAAT GTGACATGCT GTTTAGCCTG
CCCGAGATAA ATTCTCATCA AAGTGCCTAT TGTCCGCGCT GTCAGGCAAA AATTCGTGAC
GGGCGCGACT GGTCGCTAAC GCGCCTGGCG GCAATGGCCT TCACCATGCT GTTGCTTATG
CCGTTTGCCT GGGGCGAACC GCTGTTGCAT ATCTGGCTGT TAGGCATTCG TATTGACGCC
AACGTTATGC AAGGCATCTG GCAAATGACC AAACAGGGCG ATGCGATAAC GGGGTCGATG
GTCTTTTTCT GCGTTATTGG TGCCCCGCTC ATTCTGGTGA CCTCCATAGC TTATTTATGG
TTTGGTAACC GACTGGGAAT GAATTTACGT CCGGTACTGC TGATGCTTGA GCGACTTAAA
GAGTGGGTAA TGCTCGATAT CTACCTGGTC GGCATTGGCG TTGCTTCTAT AAAGGTACAG
GATTATGCCC ATATCCAGGC TGGTGTCGGC TTGTTCTCTT TTGTGGCGTT GGTGATTTTA
ACGACGGTGA CGTTGTCACA TCTTAATGTC GAAGAACTGT GGGAGCGATT TTATCCGCAG
CGCCCCGCTA CGCGTAGGGA CGAGAAACTT CGTGTCTGTC TTGGGTGCCA TTTTACCGGC
TATCCAGATC AGCGTGGTCG CTGCCCGCGT TGCCATATCC CGCTACGCCT GCGTCGCCGT
CATAGTCTGC AAAAATGCTG GGCGGCGCTG TTAGCGTCAA TCGTTTTATT GTTACCTGCC
AACCTGTTGC CTATTTCTAT CATTTATCTG AACGGAGGAC GGCAGGAAGA TACAATTCTT
TCCGGAATTA TGTCGCTGGC AAGTAGCAAC ATTGCGGTTG CAGGAATCGT GTTTATCGCC
AGTATTCTGG TACCGTTTAC TAAAGTGATC GTCATGTTCA CTTTACTGTT GAGCATTCAT
TTTAAATGCC AGCAAGGTTT ACGCACACGC ATTCTGTTAC TGCGGATGGT GACCTGGATT
GGTCGCTGGT CGATGCTCGA CCTGTTTGTC ATATCTTTAA CCATGTCGCT GATTAATCGC
GATCAGATCC TCGCTTTTAC TATGGGACCG GCTGCGTTTT ATTTCGGCGC AGCGGTAATT
TTGACTATTC TTGCTGTGGA ATGGCTGGAC AGCCGCTTAC TTTGGGATGC ACATGAGTCA
GGAAACGCCC GCTTCGACGA CTGA
|
|---|
| Protein sequence | MALNTPQITP TKKITVRAIG EELPRGDYQR CPQCDMLFSL PEINSHQSAY CPRCQAKIRD
GRDWSLTRLA AMAFTMLLLM PFAWGEPLLH IWLLGIRIDA NVMQGIWQMT KQGDAITGSM
VFFCVIGAPL ILVTSIAYLW FGNRLGMNLR PVLLMLERLK EWVMLDIYLV GIGVASIKVQ
DYAHIQAGVG LFSFVALVIL TTVTLSHLNV EELWERFYPQ RPATRRDEKL RVCLGCHFTG
YPDQRGRCPR CHIPLRLRRR HSLQKCWAAL LASIVLLLPA NLLPISIIYL NGGRQEDTIL
SGIMSLASSN IAVAGIVFIA SILVPFTKVI VMFTLLLSIH FKCQQGLRTR ILLLRMVTWI
GRWSMLDLFV ISLTMSLINR DQILAFTMGP AAFYFGAAVI LTILAVEWLD SRLLWDAHES
GNARFDD
|
|---|
| |