| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcDH1_1792 |
|---|
| Symbol | |
|---|
| ID | 0 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli DH1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | CP001637 |
|---|
| Strand | - |
|---|
| Start bp | 1945220 |
|---|
| End bp | 1946398 |
|---|
| Gene Length | 1179 bp |
|---|
| Protein Length | 392 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | |
|---|
| Product | phosphoribosylglycinamide formyltransferase 2 |
|---|
| Protein accession | ACX39451 |
|---|
| Protein GI | 260449029 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.00174349 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGTTAT TAGGCACTGC GCTGCGTCCG GCAGCAACTC GCGTGATGTT ATTAGGCTCC
GGTGAACTGG GTAAAGAAGT GGCAATCGAG TGTCAGCGTC TCGGCGTAGA GGTGATTGCC
GTCGATCGCT ATGCCGACGC ACCAGCCATG CATGTCGCGC ATCGCTCCCA TGTCATTAAT
ATGCTTGATG GTGATGCATT ACGCCGTGTG GTTGAACTGG AAAAACCACA TTATATCGTG
CCGGAGATCG AAGCTATTGC CACCGATATG CTGATCCAAC TTGAAGAGGA AGGACTGAAT
GTTGTCCCCT GCGCTCGCGC AACGAAATTA ACGATGAATC GCGAGGGTAT CCGTCGCCTG
GCGGCAGAAG AGCTGCAGCT GCCCACTTCC ACTTATCGTT TTGCCGATAG CGAAAGCCTT
TTCCGCGAGG CGGTTGCTGA CATTGGCTAT CCCTGCATTG TAAAACCGGT GATGAGCTCT
TCCGGCAAGG GGCAGACGTT TATTCGTTCT GCAGAGCAAC TTGCTCAGGC ATGGAAGTAC
GCTCAGCAAG GCGGTCGCGC CGGAGCGGGC CGCGTAATTG TTGAAGGCGT CGTTAAGTTT
GACTTCGAAA TTACCCTGCT AACCGTCAGC GCGGTGGATG GCGTCCATTT CTGTGCACCA
GTAGGTCATC GCCAGGAAGA TGGCGACTAC CGTGAATCCT GGCAACCACA GCAAATGAGC
CCGCTTGCCC TTGAACGTGC GCAGGAGATT GCCCGTAAAG TGGTGCTGGC ACTGGGCGGT
TATGGGTTGT TTGGTGTCGA GCTATTTGTC TGTGGTGATG AGGTGATTTT CAGTGAGGTC
TCCCCTCGTC CACATGATAC CGGGATGGTG ACGTTAATTT CTCAAGATCT CTCAGAGTTT
GCCCTGCATG TACGTGCCTT CCTCGGACTT CCGGTTGGCG GGATCCGTCA GTATGGTCCT
GCAGCTTCTG CCGTTATTCT GCCACAACTG ACCAGTCAGA ATGTCACGTT TGATAATGTG
CAGAATGCCG TAGGCGCAGA TTTGCAGATT CGTTTATTTG GTAAGCCGGA AATTGATGGC
AGCCGTCGTC TGGGGGTGGC ACTGGCTACT GCAGAGAGTG TTGTTGACGC CATTGAACGC
GCGAAGCACG CCGCCGGACA GGTAAAAGTA CAGGGTTAA
|
|---|
| Protein sequence | MTLLGTALRP AATRVMLLGS GELGKEVAIE CQRLGVEVIA VDRYADAPAM HVAHRSHVIN
MLDGDALRRV VELEKPHYIV PEIEAIATDM LIQLEEEGLN VVPCARATKL TMNREGIRRL
AAEELQLPTS TYRFADSESL FREAVADIGY PCIVKPVMSS SGKGQTFIRS AEQLAQAWKY
AQQGGRAGAG RVIVEGVVKF DFEITLLTVS AVDGVHFCAP VGHRQEDGDY RESWQPQQMS
PLALERAQEI ARKVVLALGG YGLFGVELFV CGDEVIFSEV SPRPHDTGMV TLISQDLSEF
ALHVRAFLGL PVGGIRQYGP AASAVILPQL TSQNVTFDNV QNAVGADLQI RLFGKPEIDG
SRRLGVALAT AESVVDAIER AKHAAGQVKV QG
|
|---|
| |