Gene EcDH1_1749 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_1749 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp1899435 
End bp1900013 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content49% 
IMG OID 
Productflagellar transcriptional activator FlhC 
Protein accessionACX39408 
Protein GI260448986 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0010889 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGAAA AAAGCATTGT TCAGGAAGCG CGGGATATTC AGCTGGCAAT GGAATTGATC 
ACCCTGGGCG CTCGTTTGCA GATGCTGGAA AGCGAAACAC AGTTAAGTCG CGGACGCCTG
ATAAAACTTT ATAAAGAACT GCGCGGAAGC CCACCGCCGA AAGGCATGCT GCCATTCTCA
ACCGACTGGT TTATGACCTG GGAACAAAAC GTTCATGCTT CGATGTTCTG TAATGCATGG
CAGTTTTTAC TGAAAACCGG TTTGTGTAAT GGCGTCGATG CGGTGATCAA AGCCTACCGT
TTATACCTTG AACAGTGCCC ACAAGCAGAA GAAGGACCAC TGCTGGCATT AACCCGTGCC
TGGACATTGG TGCGGTTTGT TGAAAGTGGA TTACTGCAAC TTTCCAGCTG CAACTGCTGC
GGCGGCAATT TTATTACCCA CGCTCACCAG CCTGTTGGCA GCTTTGCCTG CAGCTTATGT
CAACCGCCAT CCCGGGCAGT AAAAAGACGT AAACTTTCCC AGAATCCTGC CGATATTATC
CCACAACTGC TGGATGAACA GAGAGTACAG GCTGTTTAA
 
Protein sequence
MSEKSIVQEA RDIQLAMELI TLGARLQMLE SETQLSRGRL IKLYKELRGS PPPKGMLPFS 
TDWFMTWEQN VHASMFCNAW QFLLKTGLCN GVDAVIKAYR LYLEQCPQAE EGPLLALTRA
WTLVRFVESG LLQLSSCNCC GGNFITHAHQ PVGSFACSLC QPPSRAVKRR KLSQNPADII
PQLLDEQRVQ AV