Gene EcDH1_1729 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_1729 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp1880241 
End bp1880993 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content54% 
IMG OID 
ProductABC transporter related protein 
Protein accessionACX39388 
Protein GI260448966 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.00000704293 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGCCA TTGAAGTTAA GAACCTGGTG AAAAAATTCC ACGGTCAGAC GGTGCTGCAC 
GGTATCGACC TTGAGGTAAA GCCTGGCGAA GTGGTGGCAA TTATCGGTCC GAGTGGTTCC
GGCAAAACCA CGTTGCTACG CAGCATAAAT CTGCTGGAAC AACCCGAAGC GGGAACGATC
ACCGTTGGCG ATATCACTAT TGATACTGCA CGTTCATTAA GTCAGCAAAA ATCTCTGATT
CGCCAGTTGC GTCAGCACGT CGGGTTTGTC TTCCAGAACT TTAATTTGTT TCCGCATCGT
ACGGTGCTGG AGAACATTAT TGAAGGGCCG GTGATCGTCA AAGGTGAACC GAAAGAAGAG
GCCACGGCGC GCGCTCGCGA GCTGCTGGCA AAAGTTGGGC TGGCAGGTAA AGAAACCAGC
TATCCACGTC GTTTGTCTGG CGGTCAACAG CAGCGTGTTG CGATTGCGCG TGCGCTGGCA
ATGCGTCCTG AGGTGATTTT GTTTGACGAG CCAACGTCAG CGCTGGATCC AGAGCTGGTG
GGTGAAGTCC TGAACACCAT CCGTCAGCTG GCGCAGGAAA AGCGCACGAT GGTGATTGTG
ACGCACGAAA TGAGCTTTGC CCGGGATGTT GCGGACCGGG CGATCTTTAT GGACCAGGGG
CGGATAGTCG AGCAGGGGGC CGCAAAAGCG TTATTTGCCG ACCCCGAGCA GCCTCGCACC
CGCCAGTTCC TCGAGAAGTT TCTGCTGCAA TAA
 
Protein sequence
MSAIEVKNLV KKFHGQTVLH GIDLEVKPGE VVAIIGPSGS GKTTLLRSIN LLEQPEAGTI 
TVGDITIDTA RSLSQQKSLI RQLRQHVGFV FQNFNLFPHR TVLENIIEGP VIVKGEPKEE
ATARARELLA KVGLAGKETS YPRRLSGGQQ QRVAIARALA MRPEVILFDE PTSALDPELV
GEVLNTIRQL AQEKRTMVIV THEMSFARDV ADRAIFMDQG RIVEQGAAKA LFADPEQPRT
RQFLEKFLLQ