Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcDH1_1729 |
Symbol | |
ID | 0 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli DH1 |
Kingdom | Bacteria |
Replicon accession | CP001637 |
Strand | + |
Start bp | 1880241 |
End bp | 1880993 |
Gene Length | 753 bp |
Protein Length | 250 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | |
Product | ABC transporter related protein |
Protein accession | ACX39388 |
Protein GI | 260448966 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.00000704293 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTGCCA TTGAAGTTAA GAACCTGGTG AAAAAATTCC ACGGTCAGAC GGTGCTGCAC GGTATCGACC TTGAGGTAAA GCCTGGCGAA GTGGTGGCAA TTATCGGTCC GAGTGGTTCC GGCAAAACCA CGTTGCTACG CAGCATAAAT CTGCTGGAAC AACCCGAAGC GGGAACGATC ACCGTTGGCG ATATCACTAT TGATACTGCA CGTTCATTAA GTCAGCAAAA ATCTCTGATT CGCCAGTTGC GTCAGCACGT CGGGTTTGTC TTCCAGAACT TTAATTTGTT TCCGCATCGT ACGGTGCTGG AGAACATTAT TGAAGGGCCG GTGATCGTCA AAGGTGAACC GAAAGAAGAG GCCACGGCGC GCGCTCGCGA GCTGCTGGCA AAAGTTGGGC TGGCAGGTAA AGAAACCAGC TATCCACGTC GTTTGTCTGG CGGTCAACAG CAGCGTGTTG CGATTGCGCG TGCGCTGGCA ATGCGTCCTG AGGTGATTTT GTTTGACGAG CCAACGTCAG CGCTGGATCC AGAGCTGGTG GGTGAAGTCC TGAACACCAT CCGTCAGCTG GCGCAGGAAA AGCGCACGAT GGTGATTGTG ACGCACGAAA TGAGCTTTGC CCGGGATGTT GCGGACCGGG CGATCTTTAT GGACCAGGGG CGGATAGTCG AGCAGGGGGC CGCAAAAGCG TTATTTGCCG ACCCCGAGCA GCCTCGCACC CGCCAGTTCC TCGAGAAGTT TCTGCTGCAA TAA
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Protein sequence | MSAIEVKNLV KKFHGQTVLH GIDLEVKPGE VVAIIGPSGS GKTTLLRSIN LLEQPEAGTI TVGDITIDTA RSLSQQKSLI RQLRQHVGFV FQNFNLFPHR TVLENIIEGP VIVKGEPKEE ATARARELLA KVGLAGKETS YPRRLSGGQQ QRVAIARALA MRPEVILFDE PTSALDPELV GEVLNTIRQL AQEKRTMVIV THEMSFARDV ADRAIFMDQG RIVEQGAAKA LFADPEQPRT RQFLEKFLLQ
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