| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcDH1_1726 |
|---|
| Symbol | |
|---|
| ID | 0 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli DH1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | CP001637 |
|---|
| Strand | + |
|---|
| Start bp | 1877613 |
|---|
| End bp | 1878470 |
|---|
| Gene Length | 858 bp |
|---|
| Protein Length | 285 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | |
|---|
| Product | extracellular solute-binding protein family 3 |
|---|
| Protein accession | ACX39385 |
|---|
| Protein GI | 260448963 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.0106098 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGTTTACAA ACAATGGCTC TACACTGCAA ACAGACATAA CAACATTCGG GGTGAATATG
AAATTAGCAC ATCTGGGACG TCAGGCATTG ATGGGTGTGA TGGCCGTGGC GCTGGTTGCG
GGCATGAGCG TTAAAAGTTT TGCAGATGAA GGTCTGCTTA ATAAAGTTAA AGAGCGCGGC
ACGCTGCTGG TAGGGCTGGA AGGAACTTAT CCGCCGTTCA GTTTTCAGGG AGATGACGGC
AAATTAACCG GTTTTGAAGT GGAATTTGCC CAACAGCTGG CAAAACATCT TGGCGTTGAG
GCGTCACTAA AACCGACCAA ATGGGACGGT ATGCTGGCGT CGCTGGACTC TAAACGTATT
GATGTGGTGA TTAATCAGGT CACCATTTCT GATGAGCGCA AGAAAAAATA CGATTTCTCA
ACCCCGTACA CCATTTCTGG TATTCAGGCG CTGGTGAAAA AAGGTAACGA AGGCACCATT
AAAACAGCCG ATGATCTGAA AGGCAAAAAA GTGGGGGTCG GTCTGGGCAC CAACTATGAA
GAGTGGCTGC GGCAGAATGT TCAGGGCGTC GATGTGCGTA CCTATGATGA TGACCCGACC
AAATATCAGG ATCTGCGCGT AGGGCGTATC GATGCGATCC TCGTTGATCG TCTGGCGGCG
CTGGATCTGG TGAAGAAAAC CAACGATACG CTGGCAGTAA CCGGTGAAGC ATTCTCCCGT
CAGGAGTCTG GCGTGGCGCT GCGTAAAGGA AATGAGGACC TGCTGAAAGC AGTGAATGAT
GCAATTGCGG AAATGCAAAA AGATGGCACT CTGCAAGCCC TTTCCGAAAA ATGGTTTGGT
GCTGATGTGA CCAAATAA
|
|---|
| Protein sequence | MFTNNGSTLQ TDITTFGVNM KLAHLGRQAL MGVMAVALVA GMSVKSFADE GLLNKVKERG
TLLVGLEGTY PPFSFQGDDG KLTGFEVEFA QQLAKHLGVE ASLKPTKWDG MLASLDSKRI
DVVINQVTIS DERKKKYDFS TPYTISGIQA LVKKGNEGTI KTADDLKGKK VGVGLGTNYE
EWLRQNVQGV DVRTYDDDPT KYQDLRVGRI DAILVDRLAA LDLVKKTNDT LAVTGEAFSR
QESGVALRKG NEDLLKAVND AIAEMQKDGT LQALSEKWFG ADVTK
|
|---|
| |