Gene EcDH1_1724 details

Gene Information

• Locus tag: EcDH1_1724
• ID: 0
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Escherichia coli DH1
• Kingdom: Bacteria
• Replicon accession: CP001637
• Strand: +
• Start bp: 1876266
• End bp: 1876985
• Gene Length: 720 bp
• Protein Length: 239 aa
• Translation table: 11
• GC content: 54%
• Product: RNA polymerase, sigma 28 subunit, FliA/WhiG
• Protein accession: ACX39383
• Protein GI: 260448961

Plasmid Coverage information

• Num covering plasmid clones: 26
• Plasmid unclonability p-value: 0.0719948
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAATTCAC TCTATACCGC TGAAGGTGTA ATGGATAAAC ACTCGCTGTG GCAGCGTTAT 
GTCCCGCTGG TGCGTCACGA AGCATTGCGC CTGCAGGTTC GACTGCCCGC GAGCGTGGAA 
CTTGACGATC TGCTACAGGC GGGCGGCATT GGGTTACTTA ATGCCGTCGA ACGCTATGAC 
GCCCTACAAG GAACGGCATT TACAACTTAC GCAGTGCAGC GTATCCGTGG CGCTATGCTG 
GATGAACTTC GCAGCCGTGA CTGGGTGCCG CGCAGCGTGC GACGCAACGC GCGTGAAGTG 
GCACAGGCAA TAGGGCAACT GGAGCAGGAA CTTGGCCGCA ACGCCACGGA AACTGAGGTA 
GCGGAACGTT TAGGGATCGA TATTGCCGAT TATCGCCAAA TGTTGCTCGA CACCAATAAC 
AGCCAGCTCT TCTCCTACGA TGAGTGGCGC GAAGAGCACG GCGATAGCAT CGAACTGGTT 
ACTGATGATC ATCAGCGAGA AAACCCGCTA CAACAACTAC TGGACAGTAA TCTGCGCCAG 
CGGGTGATGG AAGCCATCGA AACGTTGCCG GAGCGCGAAA AACTGGTATT AACCCTCTAT 
TACCAGGAAG AGCTGAATCT CAAAGAGATT GGCGCGGTGC TGGAGGTCGG GGAATCGCGG 
GTCAGTCAGT TACACAGCCA GGCTATTAAA CGGTTACGCA CTAAACTGGG TAAGTTATAA 

 

Protein sequence

MNSLYTAEGV MDKHSLWQRY VPLVRHEALR LQVRLPASVE LDDLLQAGGI GLLNAVERYD 
ALQGTAFTTY AVQRIRGAML DELRSRDWVP RSVRRNAREV AQAIGQLEQE LGRNATETEV 
AERLGIDIAD YRQMLLDTNN SQLFSYDEWR EEHGDSIELV TDDHQRENPL QQLLDSNLRQ 
RVMEAIETLP EREKLVLTLY YQEELNLKEI GAVLEVGESR VSQLHSQAIK RLRTKLGKL