Gene EcDH1_1722 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_1722 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp1872777 
End bp1874183 
Gene Length1407 bp 
Protein Length468 aa 
Translation table11 
GC content52% 
IMG OID 
Productflagellar hook-associated 2 domain protein 
Protein accessionACX39381 
Protein GI260448959 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.906603 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAAGTA TTTCATCGCT GGGAGTCGGG TCAGGTCTGG ATTTAAGTTC CATCCTTGAT 
AGCCTCACCG CCGCGCAAAA AGCGACGCTA ACCCCCATTT CAAATCAGCA ATCGTCGTTT
ACCGCTAAAC TTAGCGCCTA CGGTACGCTG AAAAGCGCGC TGACGACTTT CCAGACCGCC
AATACTGCAT TGTCTAAAGC CGATCTTTTT TCCGCCACCA GCACCACCAG CAGCACCACC
GCGTTCAGTG CCACCACTGC GGGTAACGCC ATCGCCGGGA AATACACCAT CAGCGTCACC
CATCTGGCGC AGGCGCAAAC CCTGACCACG CGCACCACCA GAGACGATAC GAAAACGGCG
ATCGCCACCA GCGACAGTAA ACTCACCATT CAACAAGGCG GCGACAAAGA TCCGATTACC
ATTGATATCA GCGCGGCTAA CTCATCGTTA AGCGGGATCC GTGATGCCAT CAACAACGCA
AAAGCAGGCG TAAGCGCAAG CATCATTAAC GTGGGTAACG GTGAATATCG TCTGTCAGTC
ACATCAAATG ACACCGGCCT TGATAATGCG ATGACACTCT CGGTCAGCGG TGATGATGCG
CTACAAAGTT TTATGGGCTA TGACGCCAGT GCCAGCAGCA ACGGTATGGA GGTCTCGGTT
GCCGCCCAGA ATGCGCAGCT GACAGTCAAC AACGTCGCCA TCGAGAACAG CAGCAACACC
ATCAGCGACG CGCTGGAAAA CATCACCCTG AACCTGAACG ATGTCACCAC GGGCAACCAG
ACGCTAACCA TCACTCAGGA CACCTCCAAA GCGCAAACGG CGATTAAAGA CTGGGTGAAT
GCCTACAACT CGCTAATAGA TACCTTCAGC AGCCTGACCA AATACACCGC CGTAGATGCG
GGAGCTGATA GCCAGAGTTC TAGCAATGGT GCACTGCTCG GCGACTCCAC GCTGCGGACG
ATTCAGACGC AGTTGAAATC GATGCTGAGT AATACCGTCA GTTCTTCCAG CTATAAAACG
TTGGCGCAGA TTGGTATCAC GACCGATCCC AGCGATGGCA AACTGGAACT GGATGCCGAC
AAACTCACCG CTGCACTGAA AAAAGATGCC AGCGGCGTAG GTGCATTGAT TGTTGGCGAT
GGTAAAAAAA CCGGCATCAC GACCACCATC GGCAGCAACC TGACCAGTTG GCTTTCGACA
ACGGGCATTA TTAAAGCCGC TACCGATGGC GTTAGTAAGA CCCTGAATAA ATTAACTAAA
GACTACAACG CCGCCAGCGA TCGCATTGAT GCGCAGGTCG CTCGCTACAA AGAACAATTT
ACCCAACTGG ACGTTTTAAT GACCTCGTTA AACAGCACCA GCAGCTACTT AACGCAGCAG
TTCGAAAACA ACAGTAATTC CAAGTAA
 
Protein sequence
MASISSLGVG SGLDLSSILD SLTAAQKATL TPISNQQSSF TAKLSAYGTL KSALTTFQTA 
NTALSKADLF SATSTTSSTT AFSATTAGNA IAGKYTISVT HLAQAQTLTT RTTRDDTKTA
IATSDSKLTI QQGGDKDPIT IDISAANSSL SGIRDAINNA KAGVSASIIN VGNGEYRLSV
TSNDTGLDNA MTLSVSGDDA LQSFMGYDAS ASSNGMEVSV AAQNAQLTVN NVAIENSSNT
ISDALENITL NLNDVTTGNQ TLTITQDTSK AQTAIKDWVN AYNSLIDTFS SLTKYTAVDA
GADSQSSSNG ALLGDSTLRT IQTQLKSMLS NTVSSSSYKT LAQIGITTDP SDGKLELDAD
KLTAALKKDA SGVGALIVGD GKKTGITTTI GSNLTSWLST TGIIKAATDG VSKTLNKLTK
DYNAASDRID AQVARYKEQF TQLDVLMTSL NSTSSYLTQQ FENNSNSK