Gene EcDH1_1690 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_1690 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp1847596 
End bp1848516 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content54% 
IMG OID 
Productcarboxylate/amino acid/amine transporter 
Protein accessionACX39351 
Protein GI260448929 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.00295335 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTTTCC GCCAGTTGTT ACCGCTTTTT GGCGCGCTGT TTGCGTTGTA TATCATTTGG 
GGCTCAACCT ATTTTGTCAT TCGGATTGGC GTGGAAAGCT GGCCTCCGTT AATGATGGCG
GGCGTTCGAT TCCTGGCAGC CGGTATTTTA TTGCTGGCAT TTTTGCTACT GCGCGGACAC
AAACTCCCCC CGCTACGTCC GCTGCTCAAT GCCGCGCTGA TTGGCCTGTT ATTGCTGGCT
GTCGGTAATG GCATGGTGAC GGTTGCCGAA CATCAAAATG TTCCTTCCGG CATCGCCGCC
GTAGTGGTTG CAACCGTGCC CCTCTTTACC CTGTGCTTCA GCCGCCTGTT TGGCATTAAA
ACGCGCAAAC TGGAATGGGT GGGTATTGCC ATTGGGCTTG CCGGAATCAT CATGCTCAAT
AGCGGTGGAA ATTTAAGCGG CAATCCGTGG GGCGCGATTC TGATTTTAAT CGGCTCGATT
AGCTGGGCGT TTGGCTCAGT TTATGGCTCG CGCATTACCT TACCTGTAGG GATGATGGCG
GGTGCGATTG AGATGCTGGC GGCAGGCGTG GTGTTAATGA TCGCGTCGAT GATTGCGGGT
GAAAAACTGA CGGCGCTCCC TTCCCTTTCA GGCTTCCTTG CGGTCGGCTA TCTGGCGCTG
TTTGGTTCGA TTATCGCCAT CAACGCTTAT ATGTATTTAA TCCGTAATGT CAGTCCGGCT
CTCGCCACCA GCTACGCTTA CGTTAACCCG GTGGTCGCGG TCTTGCTGGG TACGGGACTG
GGTGGAGAAA CACTGTCGAA GATTGAATGG CTGGCGCTCG GCGTAATTGT CTTCGCGGTG
GTACTGGTCA CGTTGGGAAA ATATCTCTTC CCGGCAAAAC CCGTAGTTGC GCCAGTTATT
CAGGACGCAT CAAGCGAGTA A
 
Protein sequence
MRFRQLLPLF GALFALYIIW GSTYFVIRIG VESWPPLMMA GVRFLAAGIL LLAFLLLRGH 
KLPPLRPLLN AALIGLLLLA VGNGMVTVAE HQNVPSGIAA VVVATVPLFT LCFSRLFGIK
TRKLEWVGIA IGLAGIIMLN SGGNLSGNPW GAILILIGSI SWAFGSVYGS RITLPVGMMA
GAIEMLAAGV VLMIASMIAG EKLTALPSLS GFLAVGYLAL FGSIIAINAY MYLIRNVSPA
LATSYAYVNP VVAVLLGTGL GGETLSKIEW LALGVIVFAV VLVTLGKYLF PAKPVVAPVI
QDASSE