Gene EcDH1_1689 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_1689 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp1847137 
End bp1847607 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content56% 
IMG OID 
ProductDNA mismatch endonuclease Vsr 
Protein accessionACX39350 
Protein GI260448928 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.0196387 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCGACG TTCACGATAA GGCCACTCGC AGCAAAAATA TGCGCGCGAT TGCCACGCGT 
GATACGGCGA TAGAGAAGCG CCTCGCCAGT CTGTTAACCG GGCAGGGCCT GGCATTTCGC
GTTCAGGACG CCAGTCTGCC CGGACGTCCG GATTTTGTCG TTGATGAATA TCGCTGCGTG
ATATTTACCC ATGGCTGCTT CTGGCATCAT CATCACTGCT ATCTGTTTAA AGTGCCTGCG
ACTCGAACCG AGTTCTGGCT GGAGAAGATA GGTAAAAATG TTGAGCGCGA TCGCCGCGAT
ATCAGTCGCT TGCAGGAACT CGGCTGGCGC GTATTGATTG TCTGGGAGTG CGCGTTACGT
GGGCGCGAGA AGCTGACGGA TGAAGCGCTT ACCGAGCGTC TGGAAGAGTG GATCTGCGGC
GAAGGTGCCA GCGCGCAGAT CGACACGCAG GGGATTCATT TACTCGCTTG A
 
Protein sequence
MADVHDKATR SKNMRAIATR DTAIEKRLAS LLTGQGLAFR VQDASLPGRP DFVVDEYRCV 
IFTHGCFWHH HHCYLFKVPA TRTEFWLEKI GKNVERDRRD ISRLQELGWR VLIVWECALR
GREKLTDEAL TERLEEWICG EGASAQIDTQ GIHLLA